Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 22 Aligned Residues 373 % Identity 17% Template c3uvzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	.	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	G	V
Query Conservation																																				.
Alig confidence																						.	.													.																												.	.															.
Template Conservation																						.	.																																									.	.															.
Template Sequence		W	L	G	M	V	G	G	G	Q	L	G	R	M	F	C	F	A	A	Q	S	.	.	M	G	Y	R	V	A	V	L	D	P	D	P	A	S	P	A	G	A	V	A	D	R	H	L	R	A	A	Y	D	D	E	A	A	L	A	E	L	A	G	L	.	.	C	E	A	V	S	T	E	F	E	N	V	P	A	A	.	S
Template Known Secondary structure									S													.	.	T	T								S		T	T		T	T	T	T	T	S	S					S		T	T												.	.		S					S		T	T	S				.
Template Predicted Secondary structure																						.	.																																									.	.															.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.		90
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M	T
Query Conservation
Alig confidence												.	.																																											.
Template Conservation												.	.																																											.
Template Sequence		L	D	F	L	A	R	T	T	F	V	.	.	A	P	A	G	R	C	V	A	V	A	Q	D	R	I	A	E	K	R	F	I	E	A	S	G	V	P	V	A	P	H	V	V	I	E	S	A	A	A	L	A	A	L	.	D	D	A	A	L	D	A	V	L	P	G	I	L	K	T	A	R	K	G	Q	V	R	V	S	T
Template Known Secondary structure							T	T	S			.	.	S	S										S											T	T			B		S						S						T		.							T	T		S															S
Template Predicted Secondary structure												.	.																																											.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	.	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V
Query Conservation																																		.
Alig confidence													.	.	.	.	.	.	.	.														.																									.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Sequence		A	R	E	A	R	D	A	H	A	A	L	.	.	.	.	.	.	.	.	G	G	V	P	C	V	L	E	K	R	L	P	L	K	Y	E	V	S	A	L	I	A	R	G	A	D	G	R	S	A	A	F	P	L	A	Q	N	V	.	.	.	.	.	.	.	H	H	N	G	I	L	A	L	T	I	V	P	A	P	A	A
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	T	T																							T	T	S												.	.	.	.	.	.	.			T	T								S		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.								.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C	E	S	K	L
Query Conservation
Alig confidence						.	.	.	.																	.	.																																				.																	.
Template Conservation						.	.	.	.																	.	.																																				.																	.
Template Sequence		D	T	A	R	.	.	.	.	V	E	E	A	Q	Q	A	A	V	R	I	A	D	T	L	G	.	.	Y	V	G	V	L	C	V	E	F	F	V	L	E	D	G	S	F	V	A	N	E	M	A	P	R	P	H	N	S	G	H	Y	T	V	D	.	A	C	A	T	S	Q	F	E	Q	Q	V	R	A	M	T	R	.	M
Template Known Secondary structure						.	.	.	.																T	.	.													T	T	S									S	S			G	G	G	T	T				.		B	S	S												T	.
Template Predicted Secondary structure						.	.	.	.																	.	.																																				.																	.
Template SS confidence
		238	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		D	E	K	T	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	D	V	I	H	G	L	P	L	E	.	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	G	R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q
Query Conservation																																								.
Alig confidence																																								.																			.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		P	L	G	N	P	R	Q	H	S	P	A	A	M	L	N	I	L	G	D	V	W	F	P	N	G	A	A	A	G	A	V	T	P	P	W	D	T	V	A	A	M	P	A	A	H	L	H	L	Y	G	K	E	E	A	R	V	G	.	.	.	.	.	.	R	K	M	G	H	V	N	F	T	A	E	M	R	D	D	A	V
Template Known Secondary structure								B		S									G	G	G	G		T	T		T	T	S													S	T	T									S				T	T	.	.	.	.	.	.											S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.							.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	Y	A	L	M	T	D	I	H	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	T	A	C	A	Q	L	L	R	V	P
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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