Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 42 Aligned Residues 292 % Identity 17% Template c3se7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:vana; PDBTitle: ancient vana Resolution 3.07 Å

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		1	.	.	.	.	.	.	.	.	10										.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	L	V	I	G	N	G	G	.	.	.	.	.	.	.	.	.	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L
Query Conservation												.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	I	G	I	I	F	G	G	V	S	E	E	H	D	I	S	V	K	S	A	R	E	V	A	T	H	L	G	T	G	V	F	E	P	F	Y	L	G	I	T	K	S	G	A	W	Q	L	C	D	G	P	G	E	N	W	E	D	G	N	C	R	P	A	V	L	S	P	D	R	S	V	H	G	L	L	V	L	E	Q
Template Known Secondary structure											S	S	T	T															S		T	T	T										T	T	S						S		S	S	S	S	S	S	S	S											T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	.	.	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L
Query Conservation																							.	.
Alig confidence																							.	.																																																						.	.
Template Conservation																																																																														.	.
Template Sequence		G	K	Y	E	T	I	R	L	D	L	V	L	P	V	L	H	G	K	L	G	E	D	G	A	I	Q	G	L	L	E	L	S	G	I	P	Y	V	G	C	D	I	Q	S	S	A	L	C	M	D	K	S	L	T	Y	L	V	A	R	S	A	G	I	A	T	P	N	F	W	T	V	T	A	D	E	K	I	.	.	P	T
Template Known Secondary structure		T								S								S	T	T	T	T	S	S													B	S	S											S											T	T		B									T	T	S			.	.		T
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H
Query Conservation
Alig confidence																																						.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		D	Q	L	T	Y	P	V	F	V	K	P	A	R	S	G	S	S	F	G	V	S	K	V	A	R	E	E	D	L	Q	G	A	V	E	A	A	.	.	.	.	.	.	R	E	Y	D	S	K	V	L	I	E	E	A	V	I	G	T	E	I	G	C	A	V	M	G	N	G	P	E	L	I	T	G	E	V	D	Q	I	T
Template Known Secondary structure		T	T			S	S						S	S			T	T	T	T						S												.	.	.	.	.	.	T	T	T		S										S											T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence			.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.																												.	.	.
Template Conservation			.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.
Template Sequence		L	.	.	.	.	.	.	.	.	S	G	S	D	N	S	A	V	T	V	P	A	D	.	.	.	.	.	I	S	T	T	S	R	S	L	V	Q	D	T	A	K	A	V	Y	R	A	L	G	.	.	C	R	G	L	S	R	V	D	L	F	L	T	E	D	G	K	V	V	L	N	E	V	N	T	F	P	G	M	T	S
Template Known Secondary structure			.	.	.	.	.	.	.	.			G	G	G	S				S	S			.	.	.	.	.																					T	.	.													T	T	S									S	S				S	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.
Template SS confidence
		233									.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	R	Y	P	R	M	M	T	A	A	G	L	S	R	A	D	V	I	D	R	L	V
Template Known Secondary structure		T										T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions