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Job DescriptionP15640
Confidence100.00%DateWed Jan 25 15:20:39 GMT 2012
Rank49Aligned Residues272
% Identity17%Templatec3r23B_
PDB info PDB header:ligaseChain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10 .........20.........30.........40.........50.........60.........70..
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Query Sequence  KVLVIGNGG. . . . . . . . . REHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKIDLTIVGP
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Template Sequence  RIGVIXGGVSSEKQVSIXTGNEXIANLDK. . NKYEIVPITLNEKXDL. . . . . . . . . . . . . . . . . . . IEKAKDIDFALLAL
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SSGGG...................GGG
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   2.......10.........20.........30 .........40...... ...50.........60
 
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Query Sequence  EAPLVK. . GVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTAEYQNFTEVEPA. LAYLREKGAPIVIKADGL
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Template Sequence  HGKYGEDGTVQGTLESLGIPYSGSNXLSSGICXDKNISKKILRYEGIETPDWIELTKXEDLNFDELDKLGFPLVVKPNSG
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   61........70.........80.........90.........100.........110.........120.........130.........140
 
   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  AAGKGVIVAMTLEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGG
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Template Sequence  GVKIVYDKDELISXLETVFEW. . . . . . . . . . DSEVVIEKYIKGEEITCSIFDGKQLPIISIRHAAE. . . . FFDYNAKYDD
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   145....150.........160..... ....170.........180.........190.........200 .........210
 
   230.........240.........250.........260.........270.........280.........290......... 300......
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Query Sequence  MGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPI. . . MLRMKSD
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Template Sequence  ASTIEEVIELPAEL. . . . KERVNKASLACYKALK. . CSVYARVDXXVK. DGIPYVXEVNTLPGXTQASLLPKSADAAGIH
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   211........220.... .....230.........240 .........250.. .......260.........270.........280...
 
   307..310.....
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Query Sequence  LVELCLAAC
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Template Sequence  YSKLLDXII
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   284.....290..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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