Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 21 Aligned Residues 377 % Identity 17% Template c3n6rK_ PDB info PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Resolution 3.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																				.														.	.	.	.	.	.	.
Query SS confidence																																				.														.	.	.	.	.	.	.
Query Sequence		K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	.	G	T	A	L	E	P	A	L	Q	N	V	A	I	.	.	.	.	.	.	.	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E
Query Conservation																																				.														.	.	.	.	.	.	.
Alig confidence																																				.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	I	A	N	R	G	E	I	A	C	R	V	I	K	T	A	R	K	M	G	I	S	T	V	A	I	Y	S	D	A	D	K	Q	A	L	H	V	Q	M	A	D	E	A	V	H	I	G	P	P	P	A	N	Q	S	Y	I	V	I	D	K	V	M	A	A	I	R	A	T	G	A	Q	A	V	H	P	G	Y	G
Template Known Secondary structure			B		B	S														G	G	G	S			B						S	T	T	S	S							S	S						S	S	S	S	G	G	G	T	T	S												T			S			B			S	S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
			74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.																																																			.	.
Query SS confidence		.																																																			.	.
Query Sequence		.	A	P	L	V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	.	.	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A
Query Conservation		.																																																			.	.
Alig confidence		.																																																			.	.																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		F	L	S	E	N	S	K	F	A	E	A	L	E	A	E	G	V	I	F	V	G	P	P	K	G	A	I	E	A	M	G	D	K	I	T	S	K	K	I	A	Q	E	A	N	V	S	T	V	P	G	Y	M	G	L	I	E	D	A	D	E	A	V	K	I	S	N	Q	I	G	Y	P	V	M	I	K	A	.	.	.	.
Template Known Secondary structure		S	S	T	T										T	T	T				S	S	S								T	T	S										T	T	T													S													S	S						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		A	G	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	.	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G
Query Conservation																																												.
Alig confidence		.	.																				.	.	.	.	.	.	.	.														.																									.	.	.	.	.	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		.	.	S	A	M	R	I	A	W	N	D	Q	E	A	R	E	G	F	Q	S	S	.	.	.	.	.	.	.	.	K	N	D	R	I	F	I	E	K	F	V	T	Q	P	R	H	I	E	I	Q	V	L	C	D	S	H	G	N	G	I	Y	L	G	E	R	E	C	S	.	.	.	.	.	.	I	Q	R	R	N	Q	K
Template Known Secondary structure		.	.						B		S												.	.	.	.	.	.	.	.	T											S	S												T	T	S												.	.	.	.	.	.				T	T
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
				221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E
Query Conservation
Alig confidence																.	.	.	.																	.	.																																	.
Template Conservation																.	.	.	.																	.	.																																	.
Template Sequence		V	V	E	E	A	P	S	P	F	L	D	E	A	T	.	.	.	.	R	R	A	M	G	E	Q	A	V	A	L	A	K	A	V	G	.	.	Y	A	S	A	G	T	V	E	F	I	V	D	G	Q	K	N	F	Y	F	L	E	M	N	T	R	L	Q	V	E	H	P	V	.	T	E	L	I	T	G	V	D	L	V	E
Template Known Secondary structure							S		S	S						.	.	.	.														T	T	T	.	.			S										T	T	S										S			T	T				.						T
Template Predicted Secondary structure																.	.	.	.																	.	.																																	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																	.	.																									.	.	.	.	.																																		.
Query SS confidence																	.	.																									.	.	.	.	.																																		.
Query Sequence		L	C	L	A	A	C	E	S	K	L	D	E	K	T	S	.	.	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	.	.	.	.	.	D	V	I	H	G	L	P	L	E	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	.
Query Conservation																	.	.																									.	.	.	.	.																																		.
Alig confidence																	.	.															.	.	.	.							.	.	.	.	.																				.	.	.												.
Template Conservation																																	.	.	.	.																															.	.	.
Template Sequence		Q	M	I	R	V	A	A	G	E	P	L	S	I	T	Q	G	D	V	K	L	T	G	W	A	I	E	N	R	L	Y	A	.	.	.	.	E	D	P	Y	R	G	F	L	P	S	I	G	R	L	T	R	Y	R	P	P	A	E	A	A	V	R	N	D	T	G	.	.	.	V	Y	E	G	G	E	I	S	M	Y	Y	D
Template Known Secondary structure							T	T	S				S	S		T	T	T					S									S	.	.	.	.			G	G	G	T	T								S															S	.	.	.			T	T					T	T	S
Template Predicted Secondary structure																																	.	.	.	.																															.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.					.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.				.	.	.	.	.	.	.	440	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q	K	R	A	Y	A	L	M	T	D	I	H	W	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	I	A	K	L	C	T	W	A	P	T	R	A	A	A	I	E	A	M	R	I	A	L	D	S	F	E	V	E	G
Template Known Secondary structure		S										S	S																			S
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.