Job Description P15640 Confidence 90.81% Date Wed Jan 25 15:20:39 GMT 2012 Rank 270 Aligned Residues 128 % Identity 15% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	.	.	.	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	G
Query Conservation																																				.	.	.
Alig confidence																					.	.														.	.	.
Template Conservation																					.	.
Template Sequence		A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	.	.	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E
Template Known Secondary structure								S													.	.	T	T								S											T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure																					.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P
Query Conservation
Alig confidence											.	.	.	.	.																		.										.	.	.
Template Conservation											.	.	.	.	.																		.										.	.	.
Template Sequence		I	V	A	S	A	R	A	K	N	.	.	.	.	.	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	.	I	T	E	R	G	A	N	Q	V	.	.	.	V	X	G	E	R	E	I	A	R	T	X	L	E	L	L	E	T	P
Template Known Secondary structure											.	.	.	.	.	S	S	S							S	S							.				T	T		S			.	.	.
Template Predicted Secondary structure											.	.	.	.	.																		.										.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.						.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions