Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 28 Aligned Residues 336 % Identity 15% Template c3etjB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure e. coli purk in complex with mg, adp, and2 pi Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	G	V
Query Conservation
Alig confidence																							.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	V	C	V	L	G	N	G	Q	L	G	R	M	L	R	Q	A	G	E	P	.	.	L	G	I	A	V	W	P	V	G	L	D	A	E	P	A	A	V	P	F	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	T	A	E	I	E	R	W	P	E	T	A	L
Template Known Secondary structure										S													.	.		T								T	T	S		S	T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					S	S	S
Template Predicted Secondary structure																							.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M	T
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	R	Q	L	A	R	H	P	A	F	V	N	R	D	V	F	P	I	I	A	D	R	L	T	Q	K	Q	L	F	D	K	L	H	L	P	T	A	P	W	Q	L	L	A	E	R	S	E	W	P	A	V	F	D	R	L	G	E	L	A	I	V	K	R	R	T	G	G	G	Q	W	R	L	R	A	N	E	T
Template Known Secondary structure		.	.	.					T	T		T	T	B	T	T	T	T	T						S												T			B									G	G	G										S							S	S									T	T		G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	E	.	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V
Query Conservation																																			.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.														.																							.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	L	P	A	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	E	C	I	V	E	Q	G	I	N	F	S	G	E	V	S	L	V	G	A	R	G	F	D	G	S	T	V	F	Y	P	L	T	H	N	.	.	.	.	.	.	.	.	.	L	H	Q	D	G	I	L	R	T	S	V	A	F	P	Q
Template Known Secondary structure		G	G	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T										S											T	T	S											.	.	.	.	.	.	.	.	.				T	T									S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.														.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C	E	S	K	L
Query Conservation
Alig confidence																						.	.	.	.	.																	.																.
Template Conservation																						.	.	.	.	.																	.																.
Template Sequence		A	N	A	Q	Q	Q	A	R	A	E	E	M	L	S	A	I	M	Q	E	L	.	.	.	.	.	G	Y	V	G	V	M	A	M	E	C	F	V	T	P	Q	G	.	L	L	I	N	E	L	A	P	R	V	H	N	S	G	H	.	W	T	Q	N	G	A	S	I	S	Q	F	E	L	H	L	R	A	I	T	D	L	P
Template Known Secondary structure																						.	.	.	.	.	T													T	T		.								S	S			G	G	G	T	.	T					S	S	S											T	T
Template Predicted Secondary structure																						.	.	.	.	.																	.																.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	K	T	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	D	V	I	H	G	L	P	L	E	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	G	R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q	K
Query Conservation
Alig confidence			.																						.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation			.																						.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		L	.	P	Q	P	V	V	N	N	P	S	V	M	I	N	L	I	G	S	D	V	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	W	L	K	L	P	L	V	H	L	H	W	Y	D	K	E	V	R	P	G	.	.	.	.	.	.	.	R	K	V	G	H	L	N	L	T	D	S	D	T	S	R	L	T	A
Template Known Secondary structure			.							S									S					G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	S	T	T												T	T	.	.	.	.	.	.	.											S
Template Predicted Secondary structure			.																						.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		271		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.													.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.								.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Y	A	L	M	T	D	I	H	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	E	A	L	I	P	L	L	P	P	E
Template Known Secondary structure							G	G	G	S		G	G
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions