Job Description P15640 Confidence 96.21% Date Wed Jan 25 15:20:39 GMT 2012 Rank 131 Aligned Residues 107 % Identity 13% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.
Predicted Secondary structure										.																																																														.	.	.	.	.	.
Query SS confidence										.																																																														.	.	.	.	.	.
Query Sequence		M	K	V	L	V	I	G	N	.	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	.	.	.	.	.	.	V	G	P	E
Query Conservation										.																																																														.	.	.	.	.	.
Alig confidence										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.							.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		M	N	I	V	I	T	G	A	K	G	F	V	G	K	N	L	K	A	D	L	T	S	T	T	D	H	H	I	F	E	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	T	K	E	E	E	L	E	S	A	L	L	.	.	K	A	D	F	I	V	H	L	A	G	V	F	S	L	G	N
Template Known Secondary structure								T	T	T	S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T												.	.			S											S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																		.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																			.	.			.	.	.	.	.	.	.	.
Query SS confidence																			.	.			.	.	.	.	.	.	.	.
Query Sequence		A	P	L	V	K	G	V	V	D	T	F	R	A	A	G	L	K	.	.	I	F	.	.	.	.	.	.	.	.	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T
Query Conservation																			.	.			.	.	.	.	.	.	.	.
Alig confidence																			.	.			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	Y	L	D	H	V	L	D	I	L	T	R	N	T	K	K	P	A	I	L	L	S	S	S	I	Q	A	T	Q	D	N	P	Y	G	E	S	K	L	Q	G	E	Q	L	L	R	E	Y	A	E	E	Y	G	N	T	V	Y	I	Y	R	W	P	N
Template Known Secondary structure													T	T		S	S										G	G	G	T	S		S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions