Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 29 Aligned Residues 306 % Identity 21% Template c2z04A_ PDB info PDB header:lyase Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	G	V
Query Conservation
Alig confidence																							.	.																									.	.	.	.												.	.
Template Conservation																							.	.																									.	.	.	.												.	.
Template Sequence		L	T	V	G	I	L	G	G	G	Q	L	G	W	X	T	I	L	E	G	R	K	.	.	L	G	F	K	F	H	V	L	E	D	K	E	N	A	P	A	C	R	V	A	D	R	C	F	.	.	.	.	R	T	G	Q	I	S	E	F	V	D	S	.	.	C	D	I	I	T	Y	E	F	E	H	I	K	D	E	V	L
Template Known Secondary structure										S											G	G	.	.	G	T								S	S	S	S							S	S				.	.	.	.		G	G	G								.	.		S					S	S	S
Template Predicted Secondary structure																							.	.																									.	.	.	.												.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M	T
Query Conservation
Alig confidence				.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	.	.	.	.	.	C	E	S	K	L	I	P	N	P	Q	A	L	Y	V	K	K	S	R	I	R	E	K	L	F	L	K	K	H	G	F	P	V	P	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	P	V	V	I	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.	.	.		T	T	T	B	S	S		T							T											T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	.	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V
Query Conservation																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																								.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	I	I	E	E	F	V	K	F	E	A	E	I	S	C	I	G	V	R	D	R	E	G	K	T	Y	F	Y	P	Q	P	F	N	.	.	.	.	.	.	.	.	.	K	H	E	E	G	I	L	I	Y	N	Y	V	P	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S											T	T												.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
																								134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C	E	S	K	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																																	.
Template Conservation																		.	.	.	.	.	.	.	.	.																																	.
Template Sequence		K	L	K	E	A	E	E	I	T	K	R	L	X	E	L	L	.	.	.	.	.	.	.	.	.	D	I	V	G	V	F	T	V	E	F	F	L	L	K	D	G	R	V	L	I	N	E	F	A	P	R	V	H	N	T	G	H	.	W	T	L	D	G	A	Y	T	S	Q	F	E	N	L	L	R	A	I	T	E	X	P
Template Known Secondary structure																	T	.	.	.	.	.	.	.	.	.	T													T	T	S									S	S			G	G	G	T	.	T					B	S	S											T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		D	E	K	T	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	D	V	I	H	G	L	P	L	E	.	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	G	R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q
Query Conservation																																								.
Alig confidence																		.	.	.	.	.	.	.	.	.	.													.																	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Sequence		L	G	S	T	E	L	K	L	P	S	G	X	V	N	I	L	.	.	.	.	.	.	.	.	.	.	G	K	S	Y	E	E	I	P	L	K	E	I	L	S	V	E	G	A	K	L	Y	W	Y	G	K	E	K	K	P	.	.	.	.	.	.	.	R	R	K	V	G	H	V	N	V	V	G	R	S	K	E	E	V	V
Template Known Secondary structure							B	S	S									.	.	.	.	.	.	.	.	.	.	S			G	G	G	S						T	T	S	T	T												T	.	.	.	.	.	.	.	T											S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.											.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.								.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		399	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	Y	A	L	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	V	E	R	V	F	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions