Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 48 Aligned Residues 284 % Identity 13% Template c2r85B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:purp protein pf1517; PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp Resolution 1.70 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure				.	.																																									.	.
Query SS confidence				.	.																																									.	.
Query Sequence		M	K	.	.	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	.	.	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L
Query Conservation				.	.																																									.	.
Alig confidence				.	.														.																											.	.																		.	.	.	.	.	.
Template Conservation																			.																																														.	.	.	.	.	.
Template Sequence		M	K	V	R	I	A	T	Y	A	S	H	S	A	L	Q	I	L	.	K	G	A	K	D	E	G	F	E	T	I	A	F	G	S	S	K	V	K	P	L	Y	T	K	Y	F	P	V	A	D	Y	F	I	E	E	K	Y	P	E	E	E	L	L	N	L	.	.	.	.	.	.	N	A	V	V	V	P	T	G	S	F	V
Template Known Secondary structure										S	S	T	T						.						T	T							S		G	G	G						T	T	S				S					S	S									T	.	.	.	.	.	.	T							T	T
Template Predicted Secondary structure																			.																																														.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I
Query Conservation
Alig confidence																					.																												.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																					.																												.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		A	H	L	G	I	E	L	V	E	N	M	K	V	P	Y	F	G	N	K	.	R	V	L	R	W	E	S	D	R	N	L	E	R	K	W	L	K	K	A	G	I	R	V	P	E	V	Y	.	.	.	.	.	.	.	.	.	E	D	P	D	D	I	E	K	P	V	I	V	K	P	.	.	.	.	.	G	K	G	Y	F
Template Known Secondary structure											T		S	S		B	B	S		T	.	T							S											T	T						B		.	.	.	.	.	.	.	.	.	S	S	G	G	G			S							.	.	.	.	.		T	T
Template Predicted Secondary structure																					.																												.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.										.
Predicted Secondary structure																																																.	.																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.																							.	.	.	.	.	.	.	.	.
Query Sequence		V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	E	E	A	S	F	I	V	M	V	D	.	.	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	.	.	.	.	.	.	.	.	.	P
Query Conservation																																																.	.																							.	.	.	.	.	.	.	.	.
Alig confidence																	.																															.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		L	A	K	D	P	E	D	F	W	R	K	A	E	K	F	.	L	G	I	K	R	K	E	D	L	K	N	I	Q	I	Q	E	Y	V	L	G	V	P	V	Y	P	H	Y	F	Y	S	K	V	R	E	E	L	E	L	M	S	I	D	R	R	Y	E	S	N	V	D	A	I	G	R	I	P	A	K	D	Q	L	E	F	D
Template Known Secondary structure				S	S												.	T				S	S	T	T		S	S																				T	T	T	T															G	G	G	G	G	G	S							T	S
Template Predicted Secondary structure																	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	.	G	D	P	E	T	Q	P	I	M	L	R	M	K
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		M	D	I	T	Y	T	V	I	G	N	I	P	I	V	L	R	E	S	L	L	M	D	V	I	E	A	G	E	R	V	V	K	A	A	E	E	L	M	G	G	L	W	G	P	F	C	L	E	G	V	F	T	P	D	L	E	F	V	V	F	E	I	S	A	R	I	V	A	G	T	N	I	F	V	N	G	S	P	Y	T
Template Known Secondary structure																		G	G	G																			S	S														T	T	S										S			G	G	G	G	G	G	T	T			T	T	G
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		305	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	R
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions