Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 45 Aligned Residues 328 % Identity 18% Template c2qf7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	.	G	T	A	L	E	P	A	L	Q	N	V	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D
Query Conservation																																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	V	A	N	R	S	E	I	A	I	R	V	F	R	A	A	N	E	L	G	I	K	T	V	A	I	W	A	E	E	D	K	L	A	L	H	R	F	K	A	D	E	S	Y	Q	V	G	R	G	P	H	L	A	R	D	L	G	P	I	E	S	Y	L	S	I	D	E	V	I	R	V	A	K	L	S	G	A	D
Template Known Secondary structure																						T	T									G	G	G	T	T						S	S	S	S					S		S	T	T	S	S	S				T	T																	T		S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		67	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	T	I	V	G	P	E	A	P	L	.	V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K
Query Conservation												.
Alig confidence												.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	H	P	G	Y	G	L	L	S	E	S	P	E	F	V	D	A	C	N	K	A	G	I	I	F	I	G	P	K	A	D	T	M	R	Q	L	G	N	K	V	A	A	R	N	L	A	I	S	V	G	V	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S	T	T	T	T											T	T				S	S											S											T	T			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		A	D	G	L	A	A	G	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	.	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G
Query Conservation																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	V	E	R	A	R	H	V	E	S	Q	I	L	G	D	T	H	G	N	V	V	H	L	F	E	R	D	C	S	V	Q	R	R	N	Q	K	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S												T	T	S															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	.	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M
Query Conservation																																																									.
Alig confidence					.	.	.	.	.	.											.	.	.	.																	.	.															.																			.
Template Conservation					.	.	.	.	.	.											.	.	.	.																	.	.																																		.
Template Sequence		V	E	R	.	.	.	.	.	.	A	P	A	P	Y	L	S	E	A	Q	.	.	.	.	R	Q	E	L	A	A	Y	S	L	K	I	A	G	A	T	N	.	.	Y	I	G	A	G	T	V	E	Y	L	M	D	A	D	T	G	K	F	Y	F	I	E	V	N	P	R	I	Q	V	E	H	T	V	.	T	E	V	V	T
Template Known Secondary structure					.	.	.	.	.	.		S		T	T						.	.	.	.															T	T	.	.													T	T	T	T										S			T	T				.
Template Predicted Secondary structure					.	.	.	.	.	.											.	.	.	.																	.	.																																		.
Template SS confidence
		247	.	.							250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																						.	.	.	.																										.	.	.	.	.
Query SS confidence																						.	.	.	.																										.	.	.	.	.
Query Sequence		K	S	D	L	V	E	L	C	L	A	A	C	E	S	K	L	D	E	K	T	.	.	.	.	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	.	.	.	.	.	D	V	I	H	G	L	P	L	E	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D
Query Conservation																						.	.	.	.																										.	.	.	.	.
Alig confidence																						.	.	.	.																										.	.	.	.	.																				.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		G	I	D	I	V	K	A	Q	I	H	I	L	D	G	A	A	I	G	T	P	Q	S	G	V	P	N	Q	E	D	I	R	L	N	G	H	A	L	Q	C	R	V	T	T	E	D	P	E	H	N	F	I	P	D	Y	G	R	I	T	A	Y	R	S	A	S	G	F	G	I	R	L	D	G	G	.	.	.	T	S	Y	S
Template Known Secondary structure														T	T			T	T	S	G	G	G	T				G	G	G					S									S			T	T	T	T	T																T	T							.	.	.	S			T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390
		375	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		E	Q	V	V	T	N	G	.	.	G	R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q	K	R	A	Y	A	L	M	T	D	I	H	W	D	D
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		G	A	I	I	T	R	Y	Y	D	P	L	L	V	K	V	T	A	W	A	P	N	P	L	E	A	I	S	R	M	D	R	A	L	R	E	F	R	I	R	G
Template Known Secondary structure		T					S	S	S												S	S																			S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430