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Job DescriptionP15640
Confidence100.00%DateWed Jan 25 15:20:39 GMT 2012
Rank7Aligned Residues414
% Identity50%Templatec2ip4A_
PDB info PDB header:ligaseChain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGV
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Template Sequence  XKVLVVGSGGREHALLWKAAQSPRVKRLYAAPGNAGXEALAE. . . LVPWNGDVEALADWALAEGIDLTLVGPEAPLVEGI
Template Known Secondary structure 
SST
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   1........10.........20.........30.........40.. .......50.........60.........70.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  VDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
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Template Sequence  ADAFQARGLLLFGPTQKAAXIEGSKAFAKGLXERYGIPTARYRVFREPLEALAYLEEVGVPVVVKDSGLAAGKGVTVAFD
Template Known Secondary structure  T

S


T


B

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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVT
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Template Sequence  LHQAKQAVANILNRA. . . . EGGEVVVEEYLEGEEATVLALTDGETILPLLPSQDHKRLLDGDQGPXTGGXGAVAPYP. XD
Template Known Secondary structure  TTSS....S





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   158.160.........170.. .......180.........190.........200.........210.........220.........230 ..
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  DDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLD
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Template Sequence  EATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLXLTREG. PKVLEFNARFGDPEAQALLPLLENDLVELALRVAEGRLA
Template Known Secondary structure  TTT




SS
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TTTTTB
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   233......240.........250.........260.........270.. .......280.........290.........300.........310.
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  EKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGHTVAEAQKR
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Template Sequence  GTRLSWKEGAAACVVLAAPGYPESPRKGIPLHVPE. . PPEGVLVFHAGTRRE. GGRLVSAGGRVLNVVGLGRDLKEALER
Template Known Secondary structure  G



B
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TTTTTS




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   312.......320.........330.........340...... ...350.........360. ........370.........380........
 
   401........410.........420......
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Query Sequence  AYALMTDIHWDDCFCRKDIGWRAIER
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Template Sequence  AYAYIPQVGFPGAVYRRDIGRRALAR
Template Known Secondary structure  GGGSB
TT
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   389390.........400.........410....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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