Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 17 Aligned Residues 410 % Identity 13% Template c2hjwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: crystal structure of the bc domain of acc2 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	.	.	.	.	.	.	.	P	L	V	E	T	V	F	V	.	.	.	.	.	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	.	.	.	.	.	.	.	G	V	T	D	I	P	A	L	L	D	F	A	Q	N
Query Conservation																							.	.	.	.	.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.									.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	I	A	N	N	G	I	A	A	V	K	C	M	R	S	I	R	R	W	A	Y	E	M	F	R	N	E	R	A	I	R	F	V	V	M	V	T	P	E	D	L	K	A	N	A	E	Y	I	K	M	A	D	H	Y	V	P	V	P	G	G	P	N	N	N	N	Y	A	N	V	E	L	I	V	D	I	A	K	R
Template Known Secondary structure																												S		T	T	S	S													T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		63	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure													.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	I	D	L	T	I	V	G	P	E	.	A	P	L	V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	V	Q	A	V	W	A	G	W	G	H	A	S	E	N	P	K	L	P	E	L	L	C	K	N	G	V	A	F	L	G	P	P	S	E	A	M	W	A	L	G	D	K	I	A	S	T	V	V	A	Q	T	L	Q	V	P	T	L	P	W	S	G	S	G	L	T	V	E	W	Q	G	K	R	I	S	V	P	E	D
Template Known Secondary structure		T	T		S						S	S	T	T	T	T		T									T	T				S	S								T	T		S											T	T			B			B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
						123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																																							.
Query SS confidence		.	.	.	.																																																																							.
Query Sequence		.	.	.	.	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	.	E	E	A	S	F
Query Conservation		.	.	.	.																																																																							.
Alig confidence		.	.	.	.																																																						.	.	.	.														.
Template Conservation																																																											.	.	.	.
Template Sequence		V	Y	D	K	G	C	V	K	D	V	D	E	G	L	E	A	A	E	R	I	G	F	P	L	M	I	K	A	S	E	G	G	G	G	K	G	I	R	K	A	E	S	A	E	D	F	P	I	L	F	R	Q	V	Q	S	E	I	.	.	.	.	P	G	S	P	I	F	L	M	K	L	A	Q	H	A	R	H	L	E	V
Template Known Secondary structure				T	T	S	S			S													S	S						T	T			S	S		S						S	T	T	T												S	.	.	.	.	T	T											S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.					.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D
Query Conservation
Alig confidence																					.	.	.	.	.	.																						.	.	.	.																	.	.
Template Conservation																					.	.	.	.	.	.																						.	.	.	.																	.	.
Template Sequence		Q	I	L	A	D	Q	Y	G	N	A	V	S	L	F	G	R	D	C	S	.	.	.	.	.	.	I	Q	R	R	H	Q	K	I	V	E	E	A	P	A	T	I	A	P	L	A	I	.	.	.	.	F	E	F	M	E	Q	C	A	I	R	L	A	K	T	V	G	.	.	Y	V	S	A	G	T	V	E	Y	L	Y	S
Template Known Secondary structure							S	S	S												.	.	.	.	.	.			S	S	S	S							S			S	S					.	.	.	.															T	T	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.																						.	.	.	.																	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.							.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.					.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.			560	.	.	.	.	.	.	.	.	.	570	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C	E	S	K	L	D	E	K	T	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	D	V	I	H	G	.	L	P	L
Query Conservation																																																																														.
Alig confidence																					.																																																									.
Template Conservation																					.
Template Sequence		Q	D	G	S	F	H	F	L	E	L	N	P	R	L	Q	V	E	H	P	.	C	T	E	M	I	A	D	V	N	L	P	A	A	Q	L	Q	I	A	M	G	V	P	L	H	R	L	K	D	I	R	L	L	Y	G	E	S	P	W	G	V	T	P	I	S	F	E	T	P	S	N	P	P	L	A	R	G	H	V	I	A
Template Known Secondary structure		S	S	S									S	S			T	T	T		.							T												T	T			G	G	G								T	T			T	T							S	S	S		S	S						S
Template Predicted Secondary structure																					.
Template SS confidence
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590		.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.							.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																																	.	.	.	.	.	.
Query SS confidence																											.																																	.	.	.	.	.	.
Query Sequence		E	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	.	G	R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q	K	R	A	Y	A	L	M	T	D	I	H	W	D	D	C	.	.	.	.	.	.	F	C	R	K	D	I	G	W	R	A	I	E	R	E	Q
Query Conservation																											.																																	.	.	.	.	.	.
Alig confidence																											.																																	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	I	T	S	E	S	G	T	V	Q	E	L	N	F	R	S	S	K	N	V	W	G	Y	F	S	V	Q	F	G	H	C	F	S	W	G	E	N	R	E	E	A	I	S	N	M	V	V	A	L	K	E	L	S	I	R	G	D	F	R	T	T	V	E	Y	L	I	N	L	L	E	T	E	S	F	Q	N	N	D
Template Known Secondary structure										S							S	S		T	T																	S	S																		S	G	G	G	T	T	T	T									S					T	T
Template Predicted Secondary structure
Template SS confidence
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.