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Job DescriptionP15640
Confidence100.00%DateWed Jan 25 15:20:39 GMT 2012
Rank18Aligned Residues405
% Identity15%Templatec2gpwC_
PDB info PDB header:ligaseChain: C: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40........ .50.........60.........70...
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Query Sequence  KVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAI. . . . . . . . GVTDIPALLDFAQNEKIDLTIVGPE
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Template Sequence  KIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYG
Template Known Secondary structure 


TT

GGGTT
SS
SSSSGGGTTT
T



SS
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   74.....80.........90.........100.........110.........120..... ....130.........140.........
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Query Sequence  . APLVKGVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTAEYQNF. . . TEVEPALAYLREKGAPIVIKADGL
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Template Sequence  FLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA. . .
Template Known Secondary structure  TTTT
TT
SSS
ST

B

B
SS


S

SS...
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   84.....90.........100.........110.........120.........130.........140.........150.........160
 
   150.........160.........170.........180.........190.. .......200.........210.........220........
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Query Sequence  AAGKGVIVAMTLEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDG. EEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTG
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Template Sequence  . . SGGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCS. . . . . . MQRRHQ
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SGGGS





S
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   161........170.........180.........190.........200.........210.........220...... ...230..
 
   229230.........240.........250.........260.........270.........280.........290.........300........
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Query Sequence  GMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIMLRMKSDLV
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Template Sequence  KVVEEAPAPGITPEL. . . . RRYIGERCAKACVDIG. . YRGAGTFEFLFENGE. FYFIEMNTRIQVEHP. VTEMITGVDLI
Template Known Secondary structure  S
TT

....T..
TT.SS

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   238.240.........250.. .......260........ .270.........280... ......290........ .300.........
 
   309310.........320... ......330.........340.........350.........360.........370.........380.. ...
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Query Sequence  ELCLAACESKLDEKT. . SEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVAGGKVFHAGTKLADDEQVVTNGG. RVL
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Template Sequence  KEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGAGVRWESH. . . IYAGYTVPPYYDSMIG
Template Known Secondary structure  TT


S

GGG



SBB
TTT

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STT
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TT

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S
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   310.........320.........330.........340.........350.........360.........370 .........380......
 
   386...390.........400.........410... ......420........
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Query Sequence  CVTALGHTVAEAQKRAYALMTDIHWDDC. . . . . FCRKDIGWRAIEREQ
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Template Sequence  KLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGG
Template Known Secondary structure  SS
SS
BST


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   387..390.........400.........410.........420.........430....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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