Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 26 Aligned Residues 369 % Identity 18% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		K	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	.	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	G	V
Query Conservation																																				.
Alig confidence																						.	.													.																																												.
Template Conservation																						.	.																																																									.
Template Sequence		K	I	L	L	L	G	S	G	E	L	G	K	E	I	A	I	E	A	Q	R	.	.	L	G	V	E	V	V	A	V	D	R	Y	A	N	A	P	A	M	Q	V	A	H	R	S	Y	V	G	N	M	M	D	K	D	F	L	W	S	V	V	E	R	E	K	P	D	A	I	I	P	E	I	E	A	I	N	L	D	.	A
Template Known Secondary structure							S		S													.	.	T	T								S	S	T	T							S	S					S		T	T															S						S	S		S				.
Template Predicted Secondary structure																						.	.																																																									.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	.	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M
Query Conservation																																.
Alig confidence													.																			.																																					.	.	.	.
Template Conservation													.																																																								.	.	.	.
Template Sequence		L	F	E	F	E	K	D	G	Y	F	V	.	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	Y	A	T	T	L	D	E	L	Y	E	A	C	E	K	I	G	Y	P	C	H	T	K	A	.	.	.	.	I	M	S	G	S	Y	F	V	K
Template Known Secondary structure								T	T			B	.	S	S									T	S											T	T											S	S													S	S						.	.	.	.	S
Template Predicted Secondary structure													.																																																								.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	.	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V
Query Conservation																																			.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.																						.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																																			.	.	.																						.
Template Sequence		G	P	E	D	I	P	K	A	W	E	.	.	.	.	.	.	.	.	.	.	.	E	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E	N	G	E	I	V	T	T	F	.	.	.	P	K	P	V	G	H	Y	Q	I	D	G	D	Y	H	A	S	W	Q	P	A	E	.
Template Known Secondary structure		S	G	G	G						T	.	.	.	.	.	.	.	.	.	.	.													S													T	T	S							.	.	.										T	T								S			.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																																			.	.	.																						.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	.	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C	E	S
Query Conservation																																																							.
Alig confidence		.	.	.	.																						.	.																.											.
Template Conservation		.	.	.	.																						.	.																.
Template Sequence		.	.	.	.	I	S	E	K	A	E	R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	.	.	G	L	G	I	F	G	V	E	M	F	V	K	G	D	K	.	V	W	A	N	E	V	S	P	R	P	H	D	T	G	M	V	T	L	A	S	H	P	P	G	F	S	E	F	A	L	H	L	R	A	V	L	G
Template Known Secondary structure		.	.	.	.																						.	.	S	S											T	T		.								S	S			G	G	G	G	G					S		T	T		S											T
Template Predicted Secondary structure		.	.	.	.																						.	.																.
Template SS confidence
						251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		318	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure													.	.	.	.	.	.																														.
Query SS confidence													.	.	.	.	.	.																														.
Query Sequence		K	L	D	E	K	T	S	E	W	D	E	.	.	.	.	.	.	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	D	V	I	H	G	L	P	L	E	.	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	G	R	V	L	C	V	T	A	L
Query Conservation													.	.	.	.	.	.																														.
Alig confidence													.	.	.	.	.	.													.	.	.	.														.											.	.	.	.	.	.
Template Conservation																															.	.	.	.																									.	.	.	.	.	.
Template Sequence		L	P	I	P	G	E	W	V	D	G	Y	R	L	F	P	M	L	I	P	A	A	T	H	V	I	K	A	K	V	.	.	.	.	S	G	Y	S	P	R	F	R	G	L	V	K	A	L	S	V	P	N	A	T	V	R	L	F	.	.	.	.	.	.	G	K	P	E	A	Y	V	G	R	R	L	G	I	A	L	A	W
Template Known Secondary structure										T	T							S	S										S	S	.	.	.	.				S										T	T	S	T	T							.	.	.	.	.	.			S				T	T
Template Predicted Secondary structure																															.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.					.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	T	V	A	E	A	Q	K	R	A	Y	A	L	M	T	D	I	H	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	D	V	E	V	A	K	R	K	A	E	M	V	A	H	M	I	E	L
Template Known Secondary structure			S	S														T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions