Job Description P15640 Confidence 99.40% Date Wed Jan 25 15:20:39 GMT 2012 Rank 81 Aligned Residues 169 % Identity 20% Template c1wr2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1789; PDBTitle: crystal structure of ph1788 from pyrococcus horikoshii ot3 Resolution 2.00 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.					.
Query SS confidence																																																				.	.	.	.	.					.
Query Sequence		S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	.	.	.	.	.	G	V	I	V	.	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F
Query Conservation																																																				.	.	.	.	.					.
Alig confidence																																																				.	.	.	.	.					.
Template Conservation
Template Sequence		V	E	Y	E	A	K	Q	V	L	K	A	Y	G	L	P	V	P	E	E	K	L	A	K	T	L	D	E	A	L	E	Y	A	K	E	I	G	Y	P	V	V	L	K	L	M	S	P	Q	I	L	H	K	S	D	A	K	V	V	M	L	N	I	K	N	E	E	E	L	K	K	K	W	E	E	I	H	E	N	A	K	K
Template Known Secondary structure												T	T	T										S	S													S	S								T	T								T								S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		178	.	180	.	.	.				.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure								.	.	.									.																																																													.	.
Query SS confidence								.	.	.									.																																																													.	.
Query Sequence		G	D	A	G	H	R	.	.	.	I	V	I	E	E	F	L	D	.	G	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	.	.
Query Conservation								.	.	.									.																																																													.	.
Alig confidence								.	.	.									.																						.	.	.	.	.	.	.																			.														.	.
Template Conservation																																									.	.	.	.	.	.	.																			.
Template Sequence		Y	R	P	D	A	E	I	L	G	V	L	V	A	P	M	L	K	P	G	R	E	V	I	I	G	V	T	E	D	P	Q	F	G	H	A	I	M	F	G	.	.	.	.	.	.	.	L	G	G	I	F	V	E	I	L	K	D	V	T	F	R	L	V	P	.	I	T	E	K	D	A	R	K	M	I	Q	E	I	K	A
Template Known Secondary structure				T	T																										T	T	T								.	.	.	.	.	.	.			S	T	T												S	S	.												T	S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																			.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
														252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	I	L	A	G	A	E	E	P	A	D	I	D	A	I	V	D	M	L	L	K	V	S	.	.	.	.	.	.	.	.	.	K	L	V	D	D	L	K	D	Y	I	K	E	M	D	L	N	P
Template Known Secondary structure												B														.	.	.	.	.	.	.	.	.						T	T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions