Job Description P15640 Confidence 100.00% Date Wed Jan 25 15:20:39 GMT 2012 Rank 10 Aligned Residues 410 % Identity 16% Template c1ulzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase Resolution 2.20 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure				.																																															.	.	.	.	.	.	.
Query SS confidence				.																																															.	.	.	.	.	.	.
Query Sequence		M	K	.	V	L	V	I	G	N	G	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	.	.	.	.	.	.	.	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P
Query Conservation				.																																															.	.	.	.	.	.	.
Alig confidence				.																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	K	V	L	V	A	N	R	G	E	I	A	V	R	I	I	R	A	C	K	E	L	G	I	P	T	V	A	I	Y	N	E	V	E	S	T	A	R	H	V	K	L	A	D	E	A	Y	M	I	G	T	D	P	L	D	T	Y	L	N	K	Q	R	I	I	N	L	A	L	E	V	G	A	D	A	I	H	P	G	Y
Template Known Secondary structure			S	S																					T									G	G	G	T	T							S	S							S	S	T	T																T	T								S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		73		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																																																	.	.
Query SS confidence			.																																																	.	.
Query Sequence		E	.	A	P	L	V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	.	.	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L
Query Conservation			.																																																	.	.
Alig confidence			.																																																	.	.
Template Conservation
Template Sequence		G	F	L	A	E	N	A	E	F	A	K	M	C	E	E	A	G	I	T	F	I	G	P	H	W	K	V	I	E	L	M	G	D	K	A	R	S	K	E	V	M	K	K	A	G	V	P	V	V	P	G	S	D	G	V	L	K	S	L	E	E	A	K	A	L	A	R	E	I	G	Y	P	V	L	L	K	A	T	A	G
Template Known Secondary structure		S	T	T	T	T											T	T				S	S	S										S											T	T			B			B		S	S	S																S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	A	G	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	E	E	A	S	F	I	V	M	V	.	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G
Query Conservation																																																						.
Alig confidence																																																						.																.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		G	G	G	R	G	I	R	I	C	R	N	E	E	E	L	V	K	N	Y	E	Q	A	S	R	E	A	E	K	A	F	G	R	G	D	L	L	L	E	K	F	I	E	N	P	K	H	I	E	Y	Q	V	L	G	D	K	H	G	N	V	I	H	L	G	E	R	D	C	S	.	.	.	.	.	.	I	Q	R	R	N	Q
Template Known Secondary structure		S	S			S					S	S																		T	T	S												S												T	T	S												.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V
Query Conservation
Alig confidence																	.	.	.	.																	.	.																																.
Template Conservation																	.	.	.	.																	.	.																																.
Template Sequence		K	L	V	E	I	A	P	S	L	I	L	T	P	E	K	.	.	.	.	R	E	Y	Y	G	N	I	V	T	K	A	A	K	E	I	G	.	.	Y	Y	N	A	G	T	M	E	F	I	A	D	Q	E	G	N	L	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	V	S	E	M	V	T	G	I	D	I	V
Template Known Secondary structure								S		S	S						.	.	.	.															T	T	.	.													T	T											S			T	T			.
Template Predicted Secondary structure																	.	.	.	.																	.	.																																.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																										.	.	.	.	.																																			.
Query SS confidence																																										.	.	.	.	.																																			.
Query Sequence		E	L	C	L	A	A	C	E	S	K	L	D	E	K	T	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	.	.	.	.	.	D	V	I	H	G	L	P	L	E	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	D	D	E	Q	V	V	T	N	G	G	.
Query Conservation																																										.	.	.	.	.																																			.
Alig confidence																									.	.																.	.	.	.	.																				.	.	.													.
Template Conservation																									.	.																																								.	.	.
Template Sequence		K	W	Q	I	K	I	A	A	G	E	P	L	T	I	K	Q	E	D	V	K	F	N	G	.	.	Y	A	I	E	C	R	I	N	A	E	D	P	K	K	N	F	A	P	S	T	R	V	I	E	R	Y	Y	V	P	G	G	F	G	I	R	V	E	H	A	.	.	.	A	A	R	G	F	E	V	T	P	Y	Y	D	S
Template Known Secondary structure									T	T							G	G	G					S	.	.									S			G	G	G	T	T					S	B			S						S	T	T							.	.	.			T	T		B			S	S	S
Template Predicted Secondary structure																									.	.																																								.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.						.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		R	V	L	C	V	T	A	L	G	H	T	V	A	E	A	Q	K	R	A	Y	A	L	M	T	D	I	H	W	D	D	C	.	.	.	.	.	F	C	R	K	D	I	G	W	R	A	I	E	R	E	Q
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		M	I	A	K	L	I	T	W	A	P	T	W	D	E	A	V	E	R	M	R	A	A	L	E	T	Y	E	I	T	G	V	K	T	T	I	P	L	L	I	N	I	M	K	E	K	D	F	K	A	G	K
Template Known Secondary structure											S	S														T					S	S			S																T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.