Job Description P15640 Confidence 99.95% Date Wed Jan 25 15:20:39 GMT 2012 Rank 54 Aligned Residues 236 % Identity 19% Template c1uc8B_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:lysine biosynthesis enzyme; PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8 Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	A	P	L	V	K	.	G	V	V	D	T	F	R	A	A	G	L	K
Query Conservation																																																																					.
Alig confidence												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	M	L	F	E	R	A	E	A	.	.	L	G	L	P	Y	K	K	V	Y	V	P	A	L	P	M	V	L	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	K	E	L	E	G	V	T	V	A	L	E	R	C	V	S	Q	S	R	G	L	A	A	A	R	Y	L	T	A	L	G	I	P
Template Known Secondary structure												.	.		T								G	G	G				B	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T	T									S	S														T	T
Template Predicted Secondary structure												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D
Query Conservation
Alig confidence				.																																																																							.	.	.	.	.	.	.
Template Conservation				.																																																																							.	.	.	.	.	.	.
Template Sequence		V	V	.	N	R	P	E	V	I	E	A	C	G	D	K	W	A	T	S	V	A	L	A	K	A	G	L	P	Q	P	K	T	A	L	A	T	D	R	E	E	A	L	R	L	M	E	A	F	G	Y	P	V	V	L	K	P	V	I	X	X	X	X	X	X	X	X	X	X	X	X	G	F	Q	.	.	.	.	.	.	.
Template Known Secondary structure				.	S																					T	T										S	S													S	S									B		S										T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																																																							.	.	.	.	.	.	.
Template SS confidence
		76	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	H	Q	L	F	Y	I	Q	E	Y	V	E	K	P	G	R	D	I	R	V	F	V	V	G	E	R	A	I	A	A	I	Y	R	A	E	N	C	P	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T											S	S									T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																														.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	P	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E	L	C	L	A	A	C	E	S	K
Query Conservation
Alig confidence																.	.	.														.															.	.	.
Template Conservation																.	.	.														.															.	.	.
Template Sequence		V	A	R	L	S	V	K	A	A	E	A	V	G	G	.	.	.	G	V	V	A	V	D	L	F	E	S	E	R	G	.	L	L	V	N	E	V	N	H	T	M	E	F	K	N	.	.	.	S	V	H	T	T	G	V	D	I	P	G	E	I	L	K	Y	A	W	S	L
Template Known Secondary structure													T	T		.	.	.	S										T	T		.								T	T				T	T	.	.	.																				T
Template Predicted Secondary structure																.	.	.														.															.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions