Return to main results Retrieve Phyre Job Id

Job DescriptionP0A940
Confidence3.26%DateThu Jan 5 11:09:19 GMT 2012
Rank62Aligned Residues24
% Identity25%Templated1u5ta1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   377..380.........390.........400
Predicted Secondary structure 







Query SS confidence 























Query Sequence  LGSDLVDQGKERLNRLGFFETVDT
Query Conservation       
  
   
  
  
  
 
Alig confidence 























Template Conservation 

 


 


  
  


  

 
Template Sequence  VGLDDLEKSIDMLKSLECFEIFQI
Template Known Secondary structure 

TTT



Template Predicted Secondary structure 







Template SS confidence 























   129130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions