Job Description P0A940 Confidence 7.40% Date Thu Jan 5 11:09:19 GMT 2012 Rank 29 Aligned Residues 162 % Identity 10% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.										.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		R	V	P	G	S	P	D	Q	V	D	V	V	Y	K	V	K	E	R	N	T	G	S	F	N	F	G	I	G	Y	G	T	E	S	G	V	S	F	Q	A	G	V	Q	Q	D	N	.	.	.	.	.	.	.	.	.	W	L	G	T	G	Y	A	V	G	I	N	G	T	K	N	D	Y	Q	T	Y	A	E	L	S	V	T
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	P	T	A	T	G	G	A	T	Q	S	G	Y	L	T	L	N	L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T
Template Known Secondary structure		S	S					T	T																									T	T												G	G	G									T	T	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	Y	F	T	V	D	G	V	S	L	G	G	R	L	F	Y	N	D	F	Q	A	D	D	A	D	L	S	D	Y	T	N	K	S	Y	G	T	D	V	T	L	G	F	P	I	N	E	Y	N	S	L	R	A	G	L	G	Y	V	H	N	S	L	S	N	M	Q	P	Q	V	A	M	W	R	Y	L	Y	S	M	G	E
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S	P	V	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	.	.	.	.	.
Template Known Secondary structure					S	S	S													S	S		T	T	T			S	S	S																S	S	S	S																				T	T							.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	S	T	S	D	Q	D	N	S	F	K	T	D	D	F	T	F	N	Y	G	W	T	Y	N	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	K	A	W	L	F	G	T	N	F	N	Y	A	F	H	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions