Job Description P0A940 Confidence 7.70% Date Thu Jan 5 11:09:19 GMT 2012 Rank 26 Aligned Residues 89 % Identity 6% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.		.	.	780	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		A	M	A	V	A	S	L	E	F	I	T	P	T	P	F	I	S	D	K	Y	A	N	S	V	R	T	S	F	F	W	D	M	G	T	V	W	D	T	N	W	D	S	S	Q	Y	S	G	Y	P	D	Y	S	D	P	S	N	I	R	M	S	A	G	I	A	L	Q	W	M	.	S	P	L	G	P	L	V	F	S	Y	A
Query Conservation																																																																						.
Alig confidence															.	.	.	.	.	.	.																											.	.	.	.	.																		.
Template Conservation															.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		Q	G	V	Q	L	T	A	K	L	G	Y	P	I	.	.	.	.	.	.	.	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	K	.	.	.	.	.	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q
Template Known Secondary structure														S	.	.	.	.	.	.	.	S	S	S																		S	B	T	T	B		.	.	.	.	.																				T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		789	790	.	.	.	.	.	.	.							.	.	800	.	.	.	.	.	.	.	.	.	810
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		Q	P	F	K	K	Y	D	G	D	.	.	.	.	.	.	K	A	E	Q	F	Q	F	N	I	G	K	T	W
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	N	N	I	G	D	A	H	T	I	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure									B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions