Job Description P0A940 Confidence 3.24% Date Thu Jan 5 11:09:19 GMT 2012 Rank 63 Aligned Residues 81 % Identity 12% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	E	D	I	S	N	T	I	R	A	L	F	A	T	G	N	F	E	D	V	R	V	L	R	D	G	D	T	L	L	V	Q	V	K	E	R	P	T	I	A	S	I	T	F	S	G	N	K	S	V	K	D	D	M	L	K	Q	N	L	E	A	S	G	V	R	V	G	E	S	L	D	R	T	T	I	A	D	I
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	K	Q	N	I	N	R	L	V	A	N	L	E	K	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	T	D	L	.	.	.	.	.	.	.	.	.	.	.	G	K	K	V	X	V	T	C	S	R	T	G	I	N	F	X	A	D	V	F	H	E	F	T	K	D	E	L	E	T	L
Template Known Secondary structure		S															T	T	S							S	S		T	T										.	.	.	.	.	.	.	.	.	.	.																				T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.												.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	G	L	E	D	F	Y	Y	S	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	S	L	L	K	K	X	Y	R	F	N	G
Template Known Secondary structure										T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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