Job Description P0A940 Confidence 6.69% Date Thu Jan 5 11:09:19 GMT 2012 Rank 31 Aligned Residues 54 % Identity 9% Template c3h0dB_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:ctsr; PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex Resolution 2.40 Å

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		20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		G	A	E	G	F	V	V	K	D	.	.	.	.	.	.	.	I	H	F	E	G	L	Q	R	V	A	V	G	A	A	L	L	S	M	P	V	R	T	G	D	T	V	N	D	E	D	I	S	N	T	I	R	A	L	F	A	T	G	N	F	E
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	R	G	Y	I	V	E	S	K	R	G	G	G	G	Y	I	R	I	X	K	V	K	T	K	S	E	A	Q	L	I	D	Q	L	L	E	L	I	D	H	R	I	S	Q	S	S	A	E	D	V	I	K	R	L	X	E	E	K	V	I	S
Template Known Secondary structure		T	T	T	T								S	T	T											S													S		S																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions