Job Description P0A940 Confidence 100.00% Date Thu Jan 5 11:09:19 GMT 2012 Rank 4 Aligned Residues 230 % Identity 21% Template c2x8xX_ PDB info PDB header:chaperone Chain: X: PDB Molecule:tlr1789 protein; PDBTitle: structure of the n-terminal domain of omp85 from the2 thermophilic cyanobacterium thermosynechococcus elongatus Resolution 1.97 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	S	A	E	I	Q	Q	I	N	I	V	G	N	H	A	F	T	T	D	E	L	I	S	H	F	Q	L	R	D	E	V	P	W	W	N	V	V	G	D	R	K	Y	Q	K	Q	K	L	A	G	D	L	E	T	L	R	S	Y	Y	L	D	R	G	Y	A	R	F	N	I	D	S	T	Q	V	S	L	T	P	D
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.																.	.	.	.									.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.																.	.	.	.									.	.	.	.	.	.
Template Sequence		D	E	P	K	V	L	I	A	E	V	V	V	E	G	A	T	P	E	L	E	Q	L	V	Y	Q	V	I	S	T	R	P	.	.	.	.	.	.	.	.	.	G	S	T	T	T	R	T	Q	L	Q	Q	D	T	N	A	.	.	.	.	I	F	A	T	G	F	F	A	.	.	.	.	.	.	D	V	N	A	V	P	R
Template Known Secondary structure															S																	T	.	.	.	.	.	.	.	.	.	T															.	.	.	.			T	T	S				.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																.	.	.	.									.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120							.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	G	I	Y	V	T	V	N	I	T	E	G	D	Q	Y	K	L	S	G	V	E	V	S	G	N	L	A	G	H	S	A	E	I	E	Q	L	T	K	I	E	P	G	E	L	Y	N	G	T	K	V	T	K	M	E	D	D	I	K	K	L	L	G	R	Y	G	Y	A	Y	P	R	V	Q	S	M	P	E	I	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	P	L	G	V	R	I	T	F	V	V	R	P	Y	P	V	L	R	A	V	Q	V	A	G	N	Q	V	L	T	Q	E	K	V	N	E	I	F	A	P	Q	I	G	R	T	L	N	L	R	E	L	Q	A	G	I	E	K	I	N	T	F	Y	R	D	N	G	Y	I	L	G	Q	V	V	G	T	P	Q	V	D	P
Template Known Secondary structure				T	T													B								S		S	S	S										G	G	G	T	T	S	B																				T	T		T	T											T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		A	D	K	T	V	K	L	R	V	N	V	D	A	G	N	R	F	Y	V	R	K	I	R	.	.	.	.	.	F	E	G	N	D	T	S	K	D	A	V	L	R	R	E	M	R	Q	M	E	G	A	W	L	G	S	D	L	V	D	Q	G	K	E	R	L	N	R	L	G	F	F	E	T	V	D	T	D	T	Q	R	V
Query Conservation																									.	.	.	.	.
Alig confidence					.	.	.																		.	.	.	.	.
Template Conservation					.	.	.
Template Sequence		D	G	V	.	.	.	V	T	L	Q	V	A	E	G	V	V	E	Q	V	T	Y	R	F	L	N	K	E	G	E	P	T	K	Q	R	T	R	D	F	V	I	S	R	E	M	D	T	Q	P	G	V	V	L	N	Q	K	T	V	Q	A	D	L	R	R	L	F	E	L	G	L	F	E	D	V	Q	V	A	L	E	P	G
Template Known Secondary structure		T	S		.	.	.									B									B		T	T	S		B					S							T	T		S			T	T	S	B																	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		208	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	S	P	D	Q	V	D	V	V	Y	K	V	K	E	R	N	T
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		Q	N	.	P	R	R	V	N	L	I	L	N	I	K	E	R	N	T
Template Known Secondary structure		S	S	.	T	T	S
Template Predicted Secondary structure				.
Template SS confidence
		285	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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