Job Description P0A940 Confidence 100.00% Date Thu Jan 5 11:09:19 GMT 2012 Rank 3 Aligned Residues 310 % Identity 97% Template c2qczA_ PDB info PDB header:membrane protein, protein transport Chain: A: PDB Molecule:outer membrane protein assembly factor yaet; PDBTitle: structure of n-terminal domain of e. coli yaet Resolution 2.70 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	F	V	V	K	D	I	H	F	E	G	L	Q	R	V	A	V	G	A	A	L	L	S	M	P	V	R	T	G	D	T	V	N	D	E	D	I	S	N	T	I	R	A	L	F	A	T	G	N	F	E	D	V	R	V	L	R	D	G	D	T	L	L	V	Q	V	K	E	R	P	T	I	A	S	I	T	F	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	F	V	V	K	D	I	H	F	E	G	L	Q	R	V	A	V	G	A	A	L	L	S	M	P	V	R	T	G	D	T	V	N	D	E	D	I	S	N	T	I	R	A	L	F	A	T	G	N	F	E	D	V	R	V	L	R	D	G	D	T	L	L	V	Q	V	K	E	R	P	T	I	A	S	I	T	F	S	G
Template Known Secondary structure					B								S		S	S	S										S			T	T		B															T	T	S											T	T																			S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	S	V	K	D	D	M	L	K	Q	N	L	E	A	S	G	V	R	V	G	E	S	L	D	R	T	T	I	A	D	I	E	K	G	L	E	D	F	Y	Y	S	V	G	K	Y	S	A	S	V	K	A	V	V	T	P	L	P	R	N	R	V	D	L	K	L	V	F	Q	E	G	V	S	A	E	I	Q	Q	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	S	V	K	D	D	M	L	K	Q	N	L	E	A	S	G	V	R	V	G	E	S	L	D	R	T	T	I	A	D	I	E	K	G	L	E	D	F	Y	Y	S	V	G	K	Y	S	A	S	V	K	A	V	V	T	P	L	P	R	N	R	V	D	L	K	L	V	F	Q	E	G	V	S	A	E	I	Q	Q	I	N
Template Known Secondary structure			S	S	S												T	T			T	T	S	B			T	T													G	G	G	G	T		T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	N	H	A	F	T	T	D	E	L	I	S	H	F	Q	L	R	D	E	V	P	W	W	N	V	V	G	D	R	K	Y	Q	K	Q	K	L	A	G	D	L	E	T	L	R	S	Y	Y	L	D	R	G	Y	A	R	F	N	I	D	S	T	Q	V	S	L	T	P	D	K	K	G	I	Y	V	T	V	N	I	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	G	N	H	A	F	T	T	D	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	H	F	Q	L	Q	K	L	A	G	D	L	E	T	L	R	S	Y	Y	L	D	R	G	Y	A	R	F	N	I	D	S	T	Q	V	S	L	T	P	D	K	K	G	I	Y	V	T	V	N	I	T
Template Known Secondary structure				S		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T																		T	T	T		T	T												T	T	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.																		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	D	Q	Y	K	L	S	G	V	E	V	S	G	N	L	A	G	H	S	A	E	I	E	Q	L	T	K	I	E	P	G	E	L	Y	N	G	T	K	V	T	K	M	E	D	D	I	K	K	L	L	G	R	Y	G	Y	A	Y	P	R	V	Q	S	M	P	E	I	N	D	A	D	K	T	V	K	L	R	V	N	V
Query Conservation
Alig confidence																											.																																											.	.
Template Conservation																											.																																											.	.
Template Sequence		E	G	D	Q	Y	K	L	S	G	V	E	V	S	G	N	L	A	G	H	S	A	E	I	E	Q	.	L	T	K	E	P	G	E	L	Y	N	G	T	K	V	T	K	M	E	D	D	I	K	K	L	L	G	R	Y	G	Y	A	Y	P	R	V	Q	S	M	P	E	I	N	.	.	D	A	T	V	K	L	R	V	N	V
Template Known Secondary structure							B								S	S			S								.						S		B			S																T	T	T	B	S	S											.	.
Template Predicted Secondary structure																											.																																											.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	G	N	R	F	Y	V	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	G	N	R	F	Y	V	R	K
Template Known Secondary structure						B
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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