Job Description P0A940 Confidence 41.98% Date Thu Jan 5 11:09:19 GMT 2012 Rank 11 Aligned Residues 93 % Identity 6% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.		.	.	780	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		M	A	V	A	S	L	E	F	I	T	P	T	P	F	I	S	D	K	Y	A	N	S	V	R	T	S	F	F	W	D	M	G	T	V	W	D	T	N	W	D	S	S	Q	Y	S	G	Y	P	D	Y	S	D	P	S	N	I	R	M	S	A	G	I	A	L	Q	W	M	.	S	P	L	G	P	L	V	F	S	Y	A	Q
Query Conservation																																																																					.
Alig confidence														.	.	.	.	.	.	.																																																	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		G	V	Q	L	T	A	K	L	G	Y	P	I	.	.	.	.	.	.	.	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	A	T	R	L	E	Y	Q	W
Template Known Secondary structure													S	.	.	.	.	.	.	.	S	S	S																			S				S	S	S																						S	S	S								S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		790	.	.	.	.	.	.	.							.	.	800	.	.	.	.	.	.	.	.	.	810
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		P	F	K	K	Y	D	G	D	.	.	.	.	.	.	K	A	E	Q	F	Q	F	N	I	G	K	T	W
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	N	I	G	D	A	G	T	V	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure			S	S					S					S	S		S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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