Job Description P0A940 Confidence 4.00% Date Thu Jan 5 11:09:19 GMT 2012 Rank 51 Aligned Residues 91 % Identity 7% Template c2jmmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein Resolution UNK

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		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.						.	.	780	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		A	M	A	V	A	S	L	E	F	I	T	P	T	P	F	I	S	D	K	Y	A	N	S	V	R	T	S	F	F	W	D	M	G	T	V	W	D	T	N	W	D	S	S	Q	Y	S	G	Y	P	D	Y	S	D	P	S	N	I	R	M	S	A	G	I	A	L	Q	W	M	.	.	.	.	.	S	P	L	G	P	L	V
Query Conservation																																																																						.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																																	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		Q	G	V	Q	L	T	A	K	L	G	Y	P	K	.	.	.	.	.	.	.	L	G	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	S	D	K	D	G	N	G	Y	I	S	A	A	E	A	S	V	S	P	V	F	A	G	G	V	E	Y	V	I	R	R	R	I	T	P	E	I	A	T	R
Template Known Secondary structure														T	.	.	.	.	.	.	.	T		T	T	T													S	S	B						S	S	S						B																S	S	S		S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	Y	A	Q	P	F	K	K	Y	D	G	D	K	A	E	Q	F	Q	F	N	I	G	K	T	W
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		L	E	Y	Q	W	T	N	N	A	.	.	.	S	D	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure								S	S	S	.	.	.	S													S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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