Job Description P0A940 Confidence 12.07% Date Thu Jan 5 11:09:19 GMT 2012 Rank 20 Aligned Residues 101 % Identity 9% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.				.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.		.	.	780	.
Predicted Secondary structure																																																		.	.	.																									.
Query SS confidence																																																		.	.	.																									.
Query Sequence		V	G	G	N	A	M	A	V	A	S	L	E	F	I	T	P	T	P	F	I	S	D	K	Y	A	N	S	V	R	T	S	F	F	W	D	M	G	T	V	W	D	T	N	W	D	S	S	Q	.	.	.	Y	S	G	Y	P	D	Y	S	D	P	S	N	I	R	M	S	A	G	I	A	L	Q	W	M	.	S	P	L	G
Query Conservation																																																		.	.	.																									.
Alig confidence																						.	.	.	.																									.	.	.																									.
Template Conservation																						.	.	.	.
Template Sequence		I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F	G	D	A	.	.	.	.	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W
Template Known Secondary structure																			S		T	.	.	.	.	T		S																										T	T																							S	S	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		782	.	.	.	.	.	.	.															790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	V	F	S	Y	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	K	K	Y	D	G	D	K	A	E	Q	F	Q	F	N	I	G	K	T	W
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure																					S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions