Job Description P37747 Confidence 99.94% Date Thu Jan 5 11:57:23 GMT 2012 Rank 35 Aligned Residues 293 % Identity 18% Template d2iida1 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain Resolution 1.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.
Predicted Secondary structure																																																.																												.	.	.	.
Query SS confidence																																																.																												.	.	.	.
Query Sequence		Y	D	Y	I	I	V	G	S	G	L	F	G	A	V	C	A	N	E	L	K	K	L	N	K	K	V	L	V	I	E	K	R	N	H	I	G	G	N	A	Y	T	E	D	C	E	G	.	I	Q	I	H	K	Y	G	A	H	I	F	H	T	N	D	K	Y	I	W	D	Y	V	N	D	L	V	E	.	.	.	.	F	N
Query Conservation																																																.																												.	.	.	.
Alig confidence																																																.																												.	.	.	.
Template Conservation
Template Sequence		K	H	V	V	I	V	G	A	G	M	A	G	L	S	A	A	Y	V	L	A	G	A	G	H	Q	V	T	V	L	E	A	S	E	R	P	G	G	R	V	R	T	Y	R	N	E	E	A	G	W	Y	A	N	L	G	P	M	R	L	P	E	K	H	R	I	V	R	E	Y	I	R	K	F	D	L	R	L	N	E	F	S
Template Known Secondary structure										B														T								S	S	S	S	S	B	T	T							T	T	T	T					S	S						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	T	N	S	P	L	A	I	Y	K	D	K	L	F	N	L	P	F	N	M	N	T	F	H	Q	M	W	G	V	K	D	P	Q	E	A	Q	N	I	I	N	A	Q	K	K	K	Y	G	D	K	V	P	E	N	L	E	E	Q	A	I	S	L	V	G	E	D	L	Y	Q	A	L	I	K	G	Y	T	E	K	Q	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	N	D	N	A	W	Y	F	I	K	N	I	R	K	K	V	G	E	V	K	K	D	P	G	L	L	K	Y	P	V	K	P	S	E	A	G	K	S	A	G	Q	L	Y	E	E	S	L	G	K	V	V	E	E	L	K	R	T	N	C	S	Y	I	L	N	K	Y	D	T	Y	S	T	K	E	Y	L	I	K	E	G
Template Known Secondary structure		S			T	T	S					T	T												G	G	G	G						G	G	G	T	T											T										S										T	T	S	B								T	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.
Query Sequence		G	R	S	A	K	E	L	P	A	F	I	I	K	R	I	P	V	R	F	T	F	D	N	N	.	.	.	.	.	.	.	.	.	Y	F	S	D	R	Y	Q	G	I	P	V	G	G	Y	T	K	L	I	E	K	M	L	E	G	V	.	.	D	V	K	L	G	I	D	F	L	K	D	K	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.																										.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	S	P	G	A	V	D	M	I	G	D	L	L	N	E	D	S	G	Y	Y	V	S	F	I	E	S	L	K	H	D	D	I	F	A	Y	E	K	R	F	D	E	I	V	D	G	M	D	K	L	P	T	A	M	Y	R	D	I	Q	D	K	V	H	F	N	A	Q	V	I	K	I	Q	Q	N	D	Q	K	V	T	V
Template Known Secondary structure															T	T		G	G	G	T	T	S	B												T	T								T	T		T	T										T	G	G	G			S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
									218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.													.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	S	L	A	S	K	A	H	R	I	I	Y	T	G	P	I	D	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	F	D	Y	R	F	G	A	L	E	Y	R	S	L	K	F	E	T	E	R	H	E	F	P	N	F	Q	G	N	A	V	I	N	F	T	D	A	N	V	P	Y	T	R
Query Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	E	T	L	S	K	E	T	P	S	V	T	A	D	Y	V	I	V	C	T	T	S	R	A	V	R	L	I	K	F	N	P	P	L	L	P	K	K	A	H	A	L	R	S	V	F	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	S	S								S						S						T	T	S				S																T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	E	H	K	H	F	D	Y	V	E	T	K	H	T	V	V	T	K	E	Y	P	L	E	W	K	V	G	D	E	P	Y	Y	P	V	N	D	N	K	N	M	E	L	F	K	K	Y	R	E	L	A	S	R	E	D	K	V	I	F	G	G	R	L	A	E	Y	K	Y	Y	D	M	H	Q	V	I	S	A	A	L	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	F	Q	H	F	S	D	P	L	T	A	S	Q	G	R	I	Y	F	A	G	E	Y	T	A	Q	A	H	G	W	I	D	S	T	I	K	S	G	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T													B	T	T					S	G	G	G	S	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																										436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		359	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	K	N	I	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	R	D	V	N	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions