Job Description P37747 Confidence 100.00% Date Thu Jan 5 11:57:23 GMT 2012 Rank 24 Aligned Residues 355 % Identity 12% Template c2b9yA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative aminooxidase; PDBTitle: crystal structure of cla-producing fatty acid isomerase2 from p. acnes Resolution 2.21 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		Y	D	Y	I	I	V	G	S	G	L	F	G	A	V	C	A	N	E	L	K	K	L	N	K	.	K	V	L	V	I	E	K	R	N	H	I	G	G	N	A	Y	T	E	D	C	E	G	I	Q	I	H	K	Y	G	A	H	I	F	H	T	N	D	K	Y	I	W	D	Y	V	N	D	L	V	E	F	N	R	F	T	N
Query Conservation																										.
Alig confidence																										.																											.
Template Conservation																																																					.
Template Sequence		S	R	I	A	I	I	G	A	G	P	A	G	L	A	A	G	M	Y	L	E	Q	A	G	F	H	D	Y	T	I	L	E	R	T	D	H	V	G	G	K	C	H	S	P	N	Y	H	G	R	R	Y	E	.	M	G	A	I	M	G	V	P	S	Y	D	T	I	Q	E	I	M	D	R	T	G	D	K	V	D	G	P	K
Template Known Secondary structure										S													T	T									S	S	S		S	S	T	T							T	T					.	S	S						T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.										.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		S	P	L	A	I	Y	K	D	K	L	F	N	L	P	F	N	M	N	T	F	H	Q	M	W	G	V	K	D	P	Q	E	A	Q	N	I	I	N	.	.	.	.	.	.	.	.	.	A	Q	K	K	K	Y	G	D	K	V	P	E	N	L	E	E	Q	A	I	S	L	V	G	E	D	L	Y	Q	A	L	I	K	G	Y
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	R	E	F	L	H	E	D	G	E	I	Y	V	P	E	K	D	P	V	R	G	P	Q	V	M	A	A	V	Q	K	L	G	Q	L	L	A	T	K	Y	Q	G	Y	D	A	N	G	H	Y	N	K	V	H	E	D	L	M	L	P	F	D	E	F	L	A	L	N	G	C	E	A	A	R	D	L	W	I	N	P	F
Template Known Secondary structure									T	T	S					G	G	G		T	T																		T	T	T	T	T	T	T	S	S	S	S	S	S				G	G	G	G	S	B								T	T		G	G	G						T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.											.	.
Predicted Secondary structure																																																								.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	K	Q	W	G	R	S	A	K	E	L	P	A	F	I	I	K	R	I	P	V	R	F	T	F	D	N	N	Y	F	S	D	R	Y	Q	G	I	P	V	G	G	Y	T	K	L	I	E	K	M	L	E	G	V	.	.	D	V	K	L	G	I	D	F	L	K	D	K	.	.	.	.	.	.	.	.	.	.	D	S
Query Conservation																																																								.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																										.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.
Template Sequence		T	A	F	G	Y	G	H	F	D	N	V	P	A	A	Y	V	L	K	Y	L	D	F	V	T	M	M	.	.	.	S	F	A	K	G	D	L	W	T	W	A	D	G	T	Q	A	M	F	E	H	L	N	A	T	L	E	H	P	A	E	R	N	V	D	I	T	R	I	T	R	E	D	G	K	V	H	I	H	T	T	D
Template Known Secondary structure									T	T	T	S	B								S							.	.	.					T						T	T													S	S	S			B		S										T	T							S	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.										.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		L	A	S	K	A	H	R	I	I	Y	T	G	P	I	D	Q	Y	.	.	.	.	.	.	.	.	.	F	D	Y	R	F	G	A	L	E	Y	R	S	L	K	F	E	T	E	R	H	E	F	P	N	F	Q	G	N	A	V	I	N	F	T	D	A	N	V	P	Y	T	R	I	I	E	H	K	H	F	D	Y	V	E	T
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	D	R	E	S	D	V	L	V	L	T	V	P	L	E	K	F	L	D	Y	S	D	A	D	D	D	E	R	E	Y	F	S	K	I	I	H	Q	Q	Y	M	V	D	A	C	L	V	K	E	Y	P	T	I	S	G	Y	V	P	D	N	M	R	P	E	R	L	G	H	V	M	V	Y	Y	H	R	W	A	D	D	P	H
Template Known Secondary structure							S						S						G	G	G	B											T	T														S	S			S	S					G	G	G	G	S	G	G	G	T	T	S									T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																													.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		K	H	T	V	V	T	K	E	Y	P	L	E	W	K	V	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	Y	Y	P	V	N	D	N	K	N	M	E	L	.	F	K	K	Y	R	E	L	A	S	R	E	D	K	V	I	F	G	G	R	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.
Template Conservation																																																																																.	.
Template Sequence		Q	I	I	T	T	Y	L	L	R	N	H	P	D	Y	A	D	K	T	Q	E	E	C	R	Q	M	V	L	D	D	M	E	T	F	G	H	P	V	E	K	I	I	E	E	Q	T	W	Y	Y	F	P	H	V	S	S	E	D	Y	K	A	G	W	Y	E	K	V	E	G	M	Q	G	R	R	N	T	F	Y	A	G	.	.
Template Known Secondary structure		S										B	T	T	B																			T	T																									T	T								T	T	T	G	G	G					S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Y	K	Y	Y	D	M	H	Q	V	I	S	A	A	L	Y	Q	V	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	M	S	F	G	N	F	D	E	V	C	H	Y	S	K	D	L	V	T	R
Template Known Secondary structure		G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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