Job Description P37747 Confidence 100.00% Date Thu Jan 5 11:57:23 GMT 2012 Rank 2 Aligned Residues 363 % Identity 43% Template c1v0jB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:udp-galactopyranose mutase; PDBTitle: udp-galactopyranose mutase from mycobacterium tuberculosis Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																								.	.
Query SS confidence																								.																								.	.
Query Sequence		Y	D	Y	I	I	V	G	S	G	L	F	G	A	V	C	A	N	E	L	K	K	L	.	N	K	K	V	L	V	I	E	K	R	N	H	I	G	G	N	A	Y	T	E	D	C	E	.	.	G	I	Q	I	H	K	Y	G	A	H	I	F	H	T	N	D	K	Y	I	W	D	Y	V	N	D	L	V	E	F	N	R	F
Query Conservation																								.																								.	.
Alig confidence																								.																								.	.
Template Conservation
Template Sequence		F	D	L	F	V	V	G	S	G	F	F	G	L	T	I	A	E	R	V	A	T	Q	L	D	K	R	V	L	V	L	E	R	R	P	H	I	G	G	N	A	Y	S	E	A	E	P	Q	T	G	I	E	V	H	K	Y	G	A	H	L	F	H	T	S	N	K	R	V	W	D	Y	V	R	Q	F	T	D	F	T	D	Y
Template Known Secondary structure			S							S																							S	S	S	S	S	S	G	G	G						T	T	T						T	T	S							S									T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	S	P	L	A	I	Y	K	D	K	L	F	N	L	P	F	N	M	N	T	F	H	Q	M	W	G	V	K	D	P	Q	E	A	Q	N	I	I	N	A	Q	K	K	K	Y	G	D	K	V	P	E	N	L	E	E	Q	A	I	S	L	V	G	E	D	L	Y	Q	A	L	I	K	G	Y	T	E	K	Q	W	G	R
Query Conservation
Alig confidence																																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		R	H	R	V	F	A	M	H	N	G	Q	A	Y	Q	F	P	M	G	L	G	L	V	S	Q	F	F	G	K	Y	F	T	P	E	Q	A	R	Q	.	.	.	L	I	A	E	Q	A	A	E	I	D	T	A	D	E	E	K	A	I	S	L	I	G	R	P	L	Y	E	A	F	V	K	G	Y	T	A	K	Q	W	Q	T
Template Known Secondary structure										T	T						S	S	S									T	S										.	.	.						G	G	G	S		S					T	T													T									T	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																	.	.													.	.
Query SS confidence																																																	.	.													.	.
Query Sequence		S	A	K	E	L	P	A	F	I	I	K	R	I	P	V	R	F	T	F	D	N	N	Y	F	S	D	R	Y	Q	G	I	P	V	G	G	Y	T	K	L	I	E	K	M	L	E	G	V	.	.	D	V	K	L	G	I	D	F	L	K	D	K	.	.	D	S	L	A	S	K	A	H	R	I	I	Y	T	G	P	I	D
Query Conservation																																																	.	.													.	.
Alig confidence																																																	.	.													.	.
Template Conservation
Template Sequence		D	P	K	E	L	P	A	A	N	I	T	R	L	P	V	R	Y	T	F	D	N	R	Y	F	S	D	T	Y	E	G	L	P	T	D	G	Y	T	A	W	L	Q	N	M	A	A	D	H	R	I	E	V	R	L	N	T	D	W	F	D	V	R	G	Q	L	R	P	G	S	P	A	A	P	V	V	Y	T	G	P	L	D
Template Known Secondary structure			G	G	G	S		G	G	G		S						S	S	S				S				S					B	T	T										T		S	T	T					S	S											G	G	G	S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		Q	Y	F	D	Y	R	F	G	A	L	E	Y	R	S	L	K	F	E	T	E	R	H	E	F	P	N	F	Q	G	N	A	V	I	N	F	T	D	A	N	V	P	Y	T	R	I	I	E	H	K	H	F	D	Y	V	.	.	.	E	T	K	H	T	V	V	T	K	E	Y	P	L	E	W	K	V	G	D	E	P	Y	Y
Query Conservation																																																								.	.	.
Alig confidence																																																								.	.	.
Template Conservation
Template Sequence		R	Y	F	D	Y	A	E	G	R	L	G	W	R	T	L	D	F	E	V	E	V	L	P	I	G	D	F	Q	G	T	A	V	M	N	Y	N	D	L	D	V	P	Y	T	R	I	H	E	F	R	H	F	H	P	E	R	D	Y	P	T	D	K	T	V	I	M	R	E	Y	S	R	F	A	E	D	D	D	E	P	Y	Y
Template Known Secondary structure				T	T	T	T	T																S	S	S		S	S	S	S	S							T	T	S	S		S					G	G	G	G		T	T	S				S	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		P	V	N	D	N	K	N	M	E	L	F	K	K	Y	R	E	L	A	.	.	.	S	R	E	D	K	V	I	F	G	G	R	L	A	E	Y	K	Y	Y	D	M	H	Q	V	I	S	A	A	L	Y	Q	V	K	N	I	M	S	T	D
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		P	I	N	T	E	A	D	R	A	L	L	A	T	Y	R	A	R	A	K	S	E	T	A	S	S	K	V	L	F	G	G	R	L	G	T	Y	Q	Y	L	D	M	H	M	A	I	A	S	A	L	N	M	Y	D	N	V	L	A	P	H
Template Known Secondary structure																																T	T	T	T	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions