Job Description P0AAB8 Confidence 75.03% Date Thu Jan 5 11:12:29 GMT 2012 Rank 26 Aligned Residues 117 % Identity 11% Template c3tvsA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cryptochrome-1; PDBTitle: structure of full-length drosophila cryptochrome Resolution 2.30 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	N	K	A	L	E	L	A	R	H	N	D	A	H	L	T	L	I	H	I	D	D	G	L	S	E	L	Y	P	G	I	Y	F	P	A	T	E	D	I	L	Q	L	L	K	N	K	S	D	N	K	L	Y	K	L	T	K	N	I	Q	W	P	K	T	K	L	R	I	E	R	G	E	M	P	E	T	L	L	E
Query Conservation
Alig confidence												.															.	.	.	.	.
Template Conservation												.															.	.	.	.	.
Template Sequence		P	A	L	L	A	A	L	A	D	K	.	D	Q	G	I	A	L	I	P	V	F	I	F	D	G	.	.	.	.	.	E	S	A	G	T	K	N	V	G	Y	N	R	M	R	F	L	L	D	S	L	Q	D	I	D	D	Q	L	Q	A	A	T	D	G	R	G	R	L	L	V	F	E	G	E	P	A	Y	I	F	R	R
Template Known Secondary structure						T	T	T	G	G	G	.	T	T	T		B									S	.	.	.	.	.	S	S	S		S	T	T																				G	G	G	S		S	S	S	S							S
Template Predicted Secondary structure												.															.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		I	M	Q	K	E	Q	C	D	L	L	V	C	G	H	H	.	H	S	F	I	N	R	L	M	P	A	Y	R	G	M	I	N	K	M	S	A	D	L	L	I	V	P	F	I
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		L	H	E	Q	V	R	L	H	R	I	C	I	E	Q	D	C	E	P	I	W	N	E	R	D	E	S	I	R	S	L	C	R	E	L	N	I	D	F	V	E	K	V	S	H
Template Known Secondary structure																			G	G	G														S	S									S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions