Job Description P0AAB8 Confidence 21.69% Date Thu Jan 5 11:12:29 GMT 2012 Rank 95 Aligned Residues 48 % Identity 15% Template c3psfA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) Resolution 2.59 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		E	T	L	L	E	I	M	Q	K	E	Q	C	D	L	L	V	C	G	H	H	H	S	F	I	N	R	L	M	P	A	Y	R	G	M	I	N	K	M	.	.	.	.	.	.	.	.	S	A	D	L	L	I	V	P	F	I
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	L	D	N	I	I	Q	S	C	Q	P	N	A	I	G	I	N	G	P	N	P	K	T	Q	K	F	Y	K	R	L	Q	E	V	L	H	K	K	Q	I	V	D	S	R	G	H	T	I	P	I	I	Y	V	E	D	E
Template Known Secondary structure														S							S	S	T																T	T		B		T	T	S		B									T
Template Predicted Secondary structure
Template SS confidence
		797	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions