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  | Insertion relative to template |
  | Deletion relative to template |
  | Catalytic residue from the CSA |
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Detailed help on interpreting your alignment |
  |   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | ||
Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||
Query Sequence |   | M | A | Y | K | H | I | G | V | A | I | S | G | . | . | N | E | E | D | A | L | L | V | N | K | A | L | E | L | A | R | H | N | D | A | H | L | T | L | I | H | I | D | D | G | L | S | E | L | Y | P | G | I | Y | F | P | A | T | E | D | I | L | Q | L | L | K | N | K | S | D | N | K | L | Y | K | L | T | K | N | I | Q |
Template Sequence |   | L | V | Y | R | R | I | L | L | T | V | D | E | D | D | N | T | S | S | E | R | A | F | R | Y | A | T | T | L | A | H | D | Y | D | V | P | L | G | I | C | S | V | L | E | S | E | P | S | K | I | Q | . | . | . | . | . | . | . | A | K | R | K | H | V | E | D | V | V | A | E | Y | V | Q | L | A | E | Q | R | G | V | N |
Template Known Secondary structure |   | S | S | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | . | . | . | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | ||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | . | . | . | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||
  |   | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |||||||
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  |   | 79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | ||||||||||||||||||||
Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | . | . | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
Query Sequence |   | W | P | K | T | K | L | R | I | E | R | G | E | M | P | E | T | L | L | E | I | M | Q | K | E | Q | C | D | L | L | V | C | G | H | H | H | S | F | I | N | . | . | R | L | M | P | A | Y | R | G | M | I | N | K | M | S | A | D | L | L | I | V | P | ||||||||||||||||||
Template Sequence |   | Q | V | E | P | L | V | Y | E | G | G | D | V | D | D | V | I | L | E | Q | V | I | P | E | F | K | P | D | L | L | V | T | G | A | D | T | E | F | P | H | S | K | I | A | G | A | I | G | P | R | L | A | R | K | A | P | I | S | V | I | V | V | R | ||||||||||||||||||
Template Known Secondary structure |   | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||
Template Predicted Secondary structure |   | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
  |   | 92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | ||||||||||||||||||
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Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format |
Phyre is for academic use only
Please cite: Protein structure prediction on the web: a case study using the Phyre server | ||||||||
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX] | ||||||||
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