Job Description P0AAB8 Confidence 25.22% Date Thu Jan 5 11:12:29 GMT 2012 Rank 84 Aligned Residues 115 % Identity 10% Template c3cvyA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:re11660p; PDBTitle: drosophila melanogaster (6-4) photolyase bound to repaired2 ds dna Resolution 2.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	L	V	N	K	A	L	E	L	A	R	H	N	D	A	H	L	T	L	.	.	I	H	I	D	D	G	L	S	E	L	Y	P	G	I	Y	F	P	A	T	E	D	I	L	Q	L	L	K	N	K	S	D	N	K	L	Y	K	L	T	K	N	I	Q	W	P	K	T	K	L	R	I	E	R	G	E	M	P	E	T	L
Query Conservation																					.	.
Alig confidence																					.	.							.	.	.	.	.																																		.	.	.
Template Conservation																													.	.	.	.	.																																		.	.	.
Template Sequence		P	A	L	S	H	I	F	T	A	A	N	A	A	P	G	R	Y	F	V	R	P	I	F	I	L	D	P	.	.	.	.	.	G	I	L	D	W	M	Q	V	G	A	N	R	W	R	F	L	Q	Q	T	L	E	D	L	D	N	Q	L	R	K	L	N	S	R	.	.	.	L	F	V	V	R	G	K	P	A	E	V	F
Template Known Secondary structure														S	T	T	S											T	.	.	.	.	.	T	T	T	T	T	S																								T	T			.	.	.						S
Template Predicted Secondary structure																													.	.	.	.	.																																		.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	E	I	M	Q	K	E	Q	C	D	L	L	V	C	G	H	H	H	S	F	I	N	R	.	L	M	P	A	Y	R	G	M	I	N	K	M	S	A	D	L	L	I	V	P	F	I
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		P	R	I	F	K	S	W	R	V	E	M	L	T	F	E	T	D	I	E	P	Y	S	V	T	R	D	A	A	V	Q	K	L	A	K	A	E	G	V	R	V	E	T	H	C	S	H
Template Known Secondary structure									T											S																	T	T									S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions