Job Description P0AAB8 Confidence 23.89% Date Thu Jan 5 11:12:29 GMT 2012 Rank 90 Aligned Residues 86 % Identity 17% Template c2j4dA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:cryptochrome dash; PDBTitle: cryptochrome 3 from arabidopsis thaliana Resolution 1.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		N	K	A	L	E	L	A	R	H	N	D	A	H	L	T	L	I	H	I	D	D	G	L	S	E	L	Y	P	G	I	Y	F	.	P	A	T	E	D	I	L	Q	L	L	K	N	K	S	D	N	K	L	Y	K	L	T	K	N	I	Q	W	P	K	T	K	L	R	I	E	R	G	E	M	P	E	T	L	L	E	I	M
Query Conservation																																		.
Alig confidence																																		.																													.	.	.
Template Conservation																																																															.	.	.
Template Sequence		N	D	A	L	Y	K	A	W	S	S	S	D	T	I	L	P	V	Y	C	L	D	P	R	L	F	H	T	T	H	F	F	N	F	P	K	T	G	A	L	R	G	G	F	L	M	E	C	L	V	D	L	R	K	N	L	M	K	R	G	L	N	.	.	.	L	L	I	R	S	G	K	P	E	E	I	L	P	S	L	A
Template Known Secondary structure											T		S										G	G	G	G	S	B		T	T	T			B	S	S																						T	T			.	.	.						S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	E	Q	C	D	L	L	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	F	G	A	R	T	V	F	A
Template Known Secondary structure					T		S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions