Return to main results Retrieve Phyre Job Id

Job DescriptionP69902
Confidence100.00%DateThu Jan 5 12:12:16 GMT 2012
Rank3Aligned Residues386
% Identity24%Templated1xk7a1
SCOP infoCoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF)
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK
Query Conservation 
  

 





    



 
   











 
  

  
          
      






 


    
 
Alig confidence 

















































........





















Template Conservation    


 






    


 
  



 







 
  

  
    ........     



 

 


    

Template Sequence  KFGPLAGLRVVFSGIEIAGPFAGQXFAEWGAEVIWIENVAWADTIRVQPN. . . . . . . . YPQLSRRNLHALSLNIFKDEGR
Template Known Secondary structure 

STTTT


SSTT

SSS

GGGGSSS........TTT

TTS
Template Predicted Secondary structure 
























........






Template SS confidence 















































































   8.10.........20.........30.........40.........50....... ..60.........70.........
 
   81........90.........100.........110.........120.........130.. .......140.........150........
Predicted Secondary structure 


















..











Query SS confidence 



















































. .

























Query Sequence  EVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSP. . YVNVKAYENVAQAAGGAASTTGFWDG
Query Conservation    
  

  




 
  

 
 



    
   

 

   




  

..       
    
 

     
    
Alig confidence 



















































..

























Template Conservation    
  

  






 


 
 



    
   

 

  





  

      
  
   

 

     
    
Template Sequence  EAFLKLXETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQ
Template Known Secondary structure  TT
S
SSSTT


TT
SS
SSS
TTTTTS


TSGGGSTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   159160.........170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  PPLVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDA
Query Conservation   
        
  

  

 





  
  

 
  




 
                                 
  
Alig confidence  .



























































................


Template Conservation  .
        
   
   
 





  
 


 

 




                   ................   
Template Sequence  . PXPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAXYEVXLRXGQYFXXDYFNGG. . . . . . . . . . . . . . . . EXC
Template Known Secondary structure  .


TTT


TTTS................


Template Predicted Secondary structure  .












................


Template SS confidence 















































































   160.........170.........180.........190.........200.........210......... 220..
 
   239240.........250.........260.........270.........280.........290.........300.. .......310...
Predicted Secondary structure 





































.....
Query SS confidence 































































. . . . .










Query Sequence  VPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQ. . . . . PHIFDIFAEIE
Query Conservation    
 
       
        
   

           
  
   

   
  
        
 .....    

   
 
Alig confidence 












.....













































.....










Template Conservation               .....   
   

 
                 
   
                       
   
 
Template Sequence  PRXSKGKDPYYAG. . . . . CGLYKCADGYIVXELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLD
Template Known Secondary structure 

BBTTB
SSBTT.....TT

ST
GGGTTSSSS
TT



BTTTSTT
Template Predicted Secondary structure 












.....






















Template SS confidence 















































































   223......230..... ....240.........250.........260.........270.........280.........290.......
 
   314.....320.........330.........340.........350.........360.........370.........380... ......390..
Predicted Secondary structure 































.








Query SS confidence 





































































.








Query Sequence  KYTVTIDKHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDI. KAAPLLGEH
Query Conservation        
  

        

   
    
   

    

       
  
     
 
          .  

  


Alig confidence 





































































.








Template Conservation        
  

        

  

    
   

    
           
    

 
   
  
      

  


Template Sequence  AWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTXDGRTCKGPNIXPKFKNNPGQIWRGXPSHGXD
Template Known Secondary structure  TS
TT



GGGSTT
T

TTS


SS

SSS









TTTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   298.300.........310.........320.........330.........340.........350.........360.........370.......
 
   393......400.........410......
Predicted Secondary structure 







Query SS confidence 























Query Sequence  TAAVLQELGYSDDEIAAMKQNHAI
Query Conservation 
  

 


    

  
   


Alig confidence 























Template Conservation 
  

  

    

  
   


Template Sequence  TAAILKNIGYSENDIQELVSKGLA
Template Known Secondary structure  TT

TTS
Template Predicted Secondary structure 







Template SS confidence 























   378.380.........390.........400.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions