Job Description P69902 Confidence 100.00% Date Thu Jan 5 12:12:16 GMT 2012 Rank 5 Aligned Residues 351 % Identity 26% Template d1x74a1 SCOP info CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) Resolution 1.79

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	P	L	Q	G	I	K	V	L	D	F	T	G	V	Q	S	G	P	S	C	T	Q	M	L	A	W	F	G	A	D	V	I	K	I	E	R	P	G	V	G	D	V	T	R	H	Q	L	R	D	I	P	D	I	D	A	L	Y	F	T	M	L	N	S	N	K	R	S	I	E	L	N	T	K	T	A	E	G	K	E
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	P	L	S	G	L	R	V	V	E	L	A	G	I	G	P	G	P	H	A	A	M	I	L	G	D	L	G	A	D	V	V	R	I	D	R	P	I	S	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	R	N	R	R	I	V	T	A	D	L	K	S	D	Q	G	L	E
Template Known Secondary structure				T	T	T	T									S	T												T	T														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		S								T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	E	K	L	I	R	E	A	D	I	L	V	E	N	F	H	P	G	A	I	D	H	M	G	F	T	W	E	H	I	Q	E	I	N	P	R	L	I	F	G	S	I	K	G	F	D	E	C	S	P	Y	V	N	V	K	A	Y	E	N	V	A	Q	A	A	G	G	A	A	S	T	T	G	F	W	D	G	P	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	L	K	L	I	A	K	A	D	V	L	I	E	G	Y	R	P	G	V	T	E	R	L	G	L	G	P	E	E	C	A	K	V	N	D	R	L	I	Y	A	R	M	T	G	W	G	Q	T	G	P	R	S	Q	Q	A	G	H	D	I	N	Y	I	S	L	N	G	I	L	H	A	I	G	R	G	D	E	R	P	V
Template Known Secondary structure								T	T		S						S		T	T						T		S									T	T								S	S		S	S	S	T	T	T	T	S											T	S	T	G	G	G	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	S	A	A	A	L	G	D	S	N	T	.	G	M	H	L	L	I	G	L	L	A	A	L	L	H	R	E	K	T	G	R	G	Q	R	V	T	M	S	M	Q	D	A	V	L	N	L	C	R	V	K	L	R	D	Q	Q	R	L	D	K	L	G	Y	L	E	E	Y	P	Q	Y	P	N	G	T	F	G	D	A	V	P
Query Conservation													.
Alig confidence													.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	L	N	L	V	G	D	F	G	G	G	S	M	F	L	L	V	G	I	L	A	A	L	W	E	R	Q	S	S	G	K	G	Q	V	V	D	A	A	M	V	D	G	S	S	V	L	I	Q	M	M	W	A	M	R	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	W	T	D	T
Template Known Secondary structure				T	T							T	T																			S																	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																		.	.	.	210	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		R	G	G	N	A	G	G	G	G	Q	P	G	W	I	L	K	C	K	G	W	E	T	D	P	N	.	A	Y	I	Y	F	T	I	Q	E	Q	N	W	E	N	T	C	K	A	I	G	K	P	E	W	I	T	D	P	A	Y	S	T	A	H	A	R	Q	P	H	I	F	D	I	F	A	E	I	E	K	Y	T	V	T	I
Query Conservation																											.
Alig confidence														.	.	.	.										.																															.	.	.	.	.
Template Conservation														.	.	.	.																																									.	.	.	.	.
Template Sequence		R	G	A	N	M	L	D	G	G	A	P	Y	.	.	.	.	Y	D	T	Y	E	C	A	D	G	R	Y	V	A	V	G	A	I	E	P	Q	F	Y	A	A	M	L	A	G	L	G	L	D	A	A	E	L	P	P	Q	N	.	.	.	.	.	D	R	A	R	W	P	E	L	R	A	L	L	T	E	A	F	A	S	H
Template Known Secondary structure		T	T		S	T	T	T	T		S	T	T	.	.	.	.							T	T	S									S												T			G	G	G	S			T	T	.	.	.	.	.		G	G	G														T	S
Template Predicted Secondary structure														.	.	.	.																																									.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	H	E	A	V	A	Y	L	T	Q	F	D	I	P	C	A	P	V	L	S	M	K	E	I	S	L	D	P	S	L	R	Q	S	G	S	V	V	E	V	E	Q	P	L	R	G	K	Y	L	T	V	G	C	P	M	K	F	S	A	F	T	P	D	I	K	A	A	P	L	L	G	E	H	T	A	A	V	L	Q	E
Query Conservation
Alig confidence																																													.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		D	R	D	H	W	G	A	V	F	A	N	S	D	A	C	V	T	P	V	L	A	F	G	E	V	H	N	E	P	H	I	I	E	R	N	T	F	Y	E	A	N	G	G	.	.	.	.	.	W	Q	P	M	P	A	P	R	F	S	R	T	A	S	S	Q	P	R	P	P	A	A	T	I	D	I	E	A	V	L	T	D
Template Known Secondary structure										T	S	S	S	S	S												T	T							T	T						S	S	S	.	.	.	.	.						S	S			S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.						.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
			400	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	G
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		W	D	G
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		358	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions