Job Description P69902 Confidence 24.38% Date Thu Jan 5 12:12:16 GMT 2012 Rank 288 Aligned Residues 96 % Identity 20% Template c3bt7A_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna (uracil-5-)-methyltransferase; PDBTitle: structure of e. coli 5-methyluridine methyltransferase trma2 in complex with 19 nucleotide t-arm analogue Resolution 2.43 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		P	L	Q	G	I	K	V	L	D	F	T	G	V	Q	S	G	P	S	C	T	Q	M	L	A	W	F	G	A	D	V	I	K	I	E	R	P	G	V	G	D	V	T	R	H	Q	L	R	D	I	P	D	I	D	A	L	Y	F	T	M	L	N	.	.	.	.	.	.	S	N	K	R	S	I	E	L	N	T	K	T	A
Query Conservation																																																															.	.	.	.	.	.
Alig confidence																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.										.	.	.	.
Template Conservation																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		K	G	S	K	G	D	L	L	E	L	Y	C	G	N	.	.	G	N	F	S	L	A	L	A	R	N	F	D	R	V	L	A	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	.	.	.	.
Template Known Secondary structure		T	T			S						S		T	T	.	.	S							G	G	G	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T			S								.	.	.	.
Template Predicted Secondary structure																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.																.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		E	G	K	E	V	M	E	K	L	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	I	L	V	E	N	F	H	P	G	A	I	D	H	M	G	F	T	W	E	H	I	Q	E	I	.	.	N	P	R	L	I	F	G	S	I	K	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.													.	.
Template Conservation		.																																				.	.	.	.	.
Template Sequence		.	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	.	.	.	.	.	R	S	G	L	D	S	E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N	P
Template Known Secondary structure		.	S								S	S					T	T	G	G	G	S		G	G	G												.	.	.	.	.	T	T											T	T	S	S							S
Template Predicted Secondary structure		.																																				.	.	.	.	.
Template SS confidence
			267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions