Job Description P69902 Confidence 79.76% Date Thu Jan 5 12:12:16 GMT 2012 Rank 65 Aligned Residues 135 % Identity 14% Template c1u5tA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.									320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.
Query Sequence		Q	N	W	E	N	T	C	K	A	I	G	K	P	E	W	I	T	D	P	A	Y	S	T	A	H	A	R	Q	P	H	I	F	D	I	F	A	E	I	E	K	Y	T	V	T	I	.	.	.	.	.	.	.	.	D	K	H	E	A	V	A	Y	L	T	Q	F	D	I	P	C	A	P	V	L	S	M	K	E	I	S	L
Query Conservation																																															.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		S	K	F	M	H	M	C	S	S	I	G	I	D	P	L	S	L	F	D	R	D	K	H	L	F	T	V	N	D	F	Y	Y	E	V	C	L	K	V	I	E	I	C	R	Q	T	K	D	M	N	G	G	V	I	S	F	Q	E	L	E	K	V	H	F	R	K	L	N	.	.	.	.	.	V	G	L	D	D	L	E	K
Template Known Secondary structure												T							T	T	S	S	G	G	G	T	T																				T	T	T	S	S	S										T	T	T	T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.
		347		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure			.																																					.																	.							.	.	.	.
Query SS confidence			.																																					.																	.							.	.	.	.
Query Sequence		D	.	P	S	L	R	Q	S	G	S	V	V	E	V	E	Q	P	L	R	G	K	Y	L	T	V	G	C	P	M	K	F	S	A	F	T	P	D	I	.	K	A	A	P	L	L	G	E	H	T	A	A	V	L	Q	E	.	L	G	Y	S	D	D	.	.	.	.	E	I	A	A	M	K	Q	N	H	A	I
Query Conservation			.																																					.																	.							.	.	.	.
Alig confidence			.														.	.																						.																	.							.	.	.	.
Template Conservation																	.	.
Template Sequence		S	I	D	M	L	K	S	L	E	C	F	E	I	F	Q	.	.	I	R	G	K	K	F	L	R	S	V	P	N	E	L	T	S	D	Q	T	K	I	L	E	I	C	S	I	L	G	Y	S	S	I	S	L	L	K	A	N	L	G	W	E	A	V	R	S	K	S	A	L	D	E	M	V	A	N	G	L	L
Template Known Secondary structure							T	T	T								.	.		T	T							S	S	S				T	T							T	T	T	T	T	S			B												S													T	T	S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions