 |
Job Description | P14175 | Confidence | 99.42% | Date | Thu Jan 5 11:33:55 GMT 2012 |
Rank | 98 | Aligned Residues | 124 |
% Identity | 16% | Template | d1pvma4 |
SCOP info | CBS-domain pair
| CBS-domain pair
| CBS-domain pair
|
Resolution | 1.50 |
|
 |
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | F | S | A | K | D | I | A | R | R | T | P | N | G | L | I | R | K | T | P | G | F | G | P | R | S | A | L | K | L | L | Q | D | E | D | R | E | Y | G | Y | V | I | E | R | G | N | K | F | V | G | A | V | S | I | D | S | L | K | T | . |
. |
. |
. |
. |
. |
A | L | T | Q | Q | Q | G | L | D | A | A | L | I | D | A |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |   |   | . | . | . |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | M | R | V | E | K | I | M | N | S | N | . |
. |
. |
F | K | T | V | N | W | N | T | T | V | F | D | A | V | K | I | M | N | E | N | H | L | Y | G | L | V | V | K | D | D | N | G | N | D | V | G | L | L | S | E | R | S | I | I | K | R | F | I | P | R | N | K | K | P | D | E | V | P | I | R | L | V | M | R | K | P |
Template Known Secondary structure |   |
|
| B | G | G | G | T | S | B | T | T | . | . | . |
|
|  |  |  | T | T |
| B |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
|
|
| G | G | G | S | B | G | G | G | T | S | B | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | A | V | D | A | Q | T | P | L | S | E | L | L | S | H | V | G | Q | A | P | C | A | . |
V | P | V | V | D | E | D | Q | Q | Y | V | G | I | I | S | K | G | M | L | L | R | A | L | D | R | E | G | V | N | N |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |
|
|
|
|
|   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
I | P | K | V | K | S | D | Y | D | V | K | D | V | A | A | Y | L | S | E | N | G | L | E | R | C | A | V | V | D | D | P | G | R | V | V | G | I | V | T | L | T | D | L | S | R | Y | L | S | R | A | S | I | T | D |
Template Known Secondary structure |   |
|
|  |  |  | T | T |
| B |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|