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Job DescriptionP14175
Confidence94.85%DateThu Jan 5 11:33:55 GMT 2012
Rank435Aligned Residues145
% Identity21%Templatec3kx2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60......... 70.... .....80.........90.........100.........110.........120.......
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Query Sequence  IEEGEIFVIMGLSGSGKST. MVRLL. . NRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNT
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Template Sequence  YQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGGT
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   106...110.........120.........130.........140...
 
   128.130.........140.........150.........160.........170....... ..180.........190. ....
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Query Sequence  AFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLAR. . . . . . . . . . . ALAINPDILLMDEA. FSAL
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Template Sequence  . ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTL
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   144.....150.........160.........170.........180.........190.........200.........210.........220..
 
   196...200.........210.........220. ........230.........
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Query Sequence  DPLIRTEMQDELVKLQAKHQRTIVFI. SHDLDEAMRIGDRIAIMQ
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Template Sequence  ATDILMGLLKQVVKR. RPDLKIIIMSATLDAEKFQRYFNDAPLLA
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   223......230....... ..240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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