 |
Job Description | P14175 | Confidence | 99.37% | Date | Thu Jan 5 11:33:55 GMT 2012 |
Rank | 111 | Aligned Residues | 117 |
% Identity | 20% | Template | c3kpbA_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:uncharacterized protein mj0100; |
PDBTitle: crystal structure of the cbs domain pair of protein mj01002 in complex with 5 -methylthioadenosine and s-adenosyl-l-3 methionine.
|
Resolution | 1.60 Å |
|
 |
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
. | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | A | K | D | I | A | R | R | T | P | N | G | L | I | R | K | T | P | G | F | G | P | R | S | A | L | K | L | L | Q | D | E | D | R | E | Y | G | Y | V | I | E | R | G | N | K | F | V | G | A | V | S | I | D | S | L | K | T | A | L | . |
T | Q | Q | Q | G | L | D | A | A | L | I | D | A | P | L | A | V | D | A |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |
|   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |   | . | . | . |   |   |   |
|   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | L | V | K | D | I | L | S | K | P | . |
. |
. |
P | I | T | A | H | S | N | I | S | I | M | E | A | A | K | I | L | I | K | H | N | I | N | H | L | P | I | V | D | E | H | G | K | L | V | G | I | I | T | S | W | D | I | A | K | A | L | A | Q | N | K | K | T | I | E | E | I | M | T | R | N | V | I | T | A | H | E |
Template Known Secondary structure |   |
| B |  |  |  |  |
|
| S |
| . | . | . |
|
|
|  |  | T | T | S | B |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |
| T | T | S | B |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T | T |
|
| B | G | G | G | T | S | B | S | S |
|
|
|  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
| . | . | . |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
388 | . | 390 | . | . | . | . | . | . | . | |
|
|
. | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |
  |
  |   |
353 | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | T | P | L | S | E | L | L | S | H | V | G | Q | A | P | C | A | . |
V | P | V | V | D | E | D | Q | Q | Y | V | G | I | I | S | K | G | M | L | L | R | A | L | D |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |
|
|
|
|
|   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|
Template Sequence |   |
D | E | P | V | D | H | V | A | I | K | M | S | K | Y | N | I | S | G | V | P | V | V | D | D | Y | R | R | V | V | G | I | V | T | S | E | D | I | S | R | L | F | G |
Template Known Secondary structure |   |
T | S | B |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
| T | T |
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
465 | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|