Job Description P14175 Confidence 99.41% Date Thu Jan 5 11:33:55 GMT 2012 Rank 101 Aligned Residues 121 % Identity 17% Template c3i8nB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp2912; PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633. Resolution 2.15 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																															.																							.	.
Query SS confidence																																															.																							.	.
Query Sequence		S	Q	V	F	S	A	K	D	I	A	R	R	T	P	N	G	L	I	R	K	T	P	G	F	G	P	R	S	A	L	K	L	L	Q	D	E	D	R	E	Y	G	Y	V	I	E	.	R	G	N	K	F	V	G	A	V	S	I	D	S	L	K	T	A	L	T	Q	Q	Q	.	.	G	L	D	A	A	L	I	D	A	P
Query Conservation																																															.																							.	.
Alig confidence															.																																.																							.	.
Template Conservation															.
Template Sequence		A	Q	D	V	P	V	T	Q	V	X	T	P	R	.	P	V	V	F	R	V	D	A	T	X	T	I	N	E	F	L	D	K	H	K	D	T	P	F	S	R	P	L	V	Y	S	E	Q	K	D	N	I	I	G	F	V	H	R	L	E	L	F	K	X	Q	Q	S	G	S	G	Q	K	Q	L	G	A	V	X	R	P	I
Template Known Secondary structure				S		B					S			G	.	G	G						T	T	S	B												T	T							S	S	S	T	T																	T	T	T	T	T	S	B	G	G	G	G		B
Template Predicted Secondary structure															.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	A	V	D	A	Q	T	P	L	S	E	L	L	S	H	V	G	Q	A	P	C	A	.	V	P	V	V	D	E	D	Q	Q	Y	V	G	I	I	S	K	G	M	L	L	R	A	L
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		Q	V	V	L	N	N	T	A	L	P	K	V	F	D	Q	X	X	T	H	R	L	Q	L	A	L	V	V	D	E	Y	G	T	V	L	G	L	V	T	L	E	D	I	F	E	H	L
Template Known Secondary structure						T	T	S	B											T	T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions