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Job DescriptionP14175
Confidence100.00%DateThu Jan 5 11:33:55 GMT 2012
Rank21Aligned Residues232
% Identity25%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG
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Template Sequence  QMTVKDLTAKY. . . . . . . . . . . . . . . . . . . . . . TEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEG
Template Known Secondary structure 
S......................STTS

TT

TTSSTT
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   12091210......... 1220.........1230.........1240.........1250.........1260. ....
 
   84.....90.........100.........110.........120.........130.........140 .........150.........
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Query Sequence  QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEE. . . . RREKALDALRQVGLENYAH
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Template Sequence  EIQIDGVSWDSITLEQW. . . . RKAFGVIPQKVFIFSG. TFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLV
Template Known Secondary structure  TTSSSS
....GGGS





SS.B
TTS
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TTTT
TTTGGGSTTGGG
B

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   1266...1270.........1280.. .......1290........ .1300.........1310.........1320.........1330.........1340
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  SYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQ
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Template Sequence  DGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIR. . . RTLKQAFADCTVILCEARIEAMLECDQFLVIE
Template Known Secondary structure  TTTTTS
TT

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...TTTTS
SSGGGSTT
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   1341........1350.........1360.........1370.........1380..... ....1390.........1400.........1410.......
 
   240.........250.........260......
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Query Sequence  NGEVVQVGTPDEILNNPANDYVRTFFR
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Template Sequence  ENKVRQYDSILELYHYPADRFVAGFIG
Template Known Secondary structure  SS
S


SBTTSS
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   1418.1420.........1430.........1440....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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