Return to main results Retrieve Phyre Job Id

Job DescriptionP14175
Confidence100.00%DateThu Jan 5 11:33:55 GMT 2012
Rank8Aligned Residues241
% Identity39%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQ
Query Conservation       
 
                       
  
   

  

  
  


  
 
 

 





  
 
      
 
Alig confidence 











....................















































Template Conservation 
    
 
 
  ....................       
  


 
  

   
 
 








  
 
      
 
Template Sequence  IKLSNITKVFHQ. . . . . . . . . . . . . . . . . . . . GTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS
Template Known Secondary structure 
....................SS

SS
STTSSTTSS

S
Template Predicted Secondary structure 

....................























Template SS confidence 















































































   2.......10... ......20.........30.........40.........50.........60.
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  VLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDE
Query Conservation 
   
                  
  
     
    

                         
               
Alig confidence 


















.



























































Template Conservation 
   
              .   
  
 
   
    

                         
    
          
Template Sequence  VLVDGQELTTLSESELTKA. RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSN
Template Known Secondary structure  TT
TT
.

SS



TTSBTTT

TTSTTTTTSS
BS
Template Predicted Secondary structure 













.































Template SS confidence 















































































   62.......70.........80 .........90.........100.........110.........120.........130.........140
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVV
Query Conservation 



  


 

 

   
 







  

      
   
  
    
 


 


    
  
 
 
 

  
 

Alig confidence 















































































Template Conservation 




 


 

 

   
 







  

      
   
  
    
 


 


       
 
 
 

  
 
 
Template Sequence  LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELI
Template Known Secondary structure 

T

SSGGGSS


BS

STT
Template Predicted Secondary structure 


























Template SS confidence 















































































   141........150.........160.........170.........180.........190.........200.........210.........220
 
   245....250.........260......
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  QVGTPDEILNNPANDYVRTFFR
Query Conservation    
   
         
  
  
Alig confidence 





















Template Conservation    
                   
Template Sequence  EQDTVSEVFSHPKTPLAQKFIQ
Template Known Secondary structure  TTTTT
SS

TTTT


Template Predicted Secondary structure 





Template SS confidence 





















   221........230.........240..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions