Job Description P14175 Confidence 99.53% Date Thu Jan 5 11:33:55 GMT 2012 Rank 77 Aligned Residues 166 % Identity 15% Template c2v8qE_ PDB info PDB header:transferase Chain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1; PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp Resolution 2.10 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		A	M	R	I	G	D	R	I	A	I	M	Q	N	.	.	G	E	V	V	Q	V	G	T	P	D	E	I	L	N	N	P	A	N	D	Y	V	R	T	F	F	R	G	V	D	I	S	Q	V	F	S	A	K	D	I	A	R	R	T	P	N	G	L	I	R	K	T	P	G	F	G	P	R	S	A	L	K	L	L	Q	D
Query Conservation															.	.
Alig confidence															.	.																																												.	.	.
Template Conservation																																																												.	.	.
Template Sequence		I	R	N	K	I	H	R	L	P	V	I	D	P	E	S	G	N	T	L	Y	I	L	T	H	K	R	I	L	K	F	L	K	L	F	I	T	E	F	P	K	P	E	F	M	S	K	S	L	E	E	L	Q	I	G	T	Y	A	N	.	.	.	I	A	M	V	R	T	T	T	P	V	Y	V	A	L	G	I	F	V	Q
Template Known Secondary structure					T		S							T	T	T																				S		S	S	S			G	G	G	G	S	B					T		S	B		S	S	.	.	.						T	T		B
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.													.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		E	D	R	E	Y	G	Y	V	I	E	R	G	N	K	F	V	G	A	V	S	I	D	S	L	K	T	A	L	T	Q	Q	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	A	L	I	D	A	P	L	A	V	D	A	Q	T	P	L	S	E	L	L	S	H	V	G	Q	A	P	C	A	.	V	P	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		H	R	V	S	A	L	P	V	V	D	E	K	G	R	V	V	D	I	Y	S	K	F	D	V	I	N	L	A	A	E	K	T	Y	N	N	L	D	V	S	V	T	K	A	L	Q	H	R	S	H	Y	F	E	G	V	L	K	C	Y	L	H	E	T	L	E	A	I	I	N	R	L	V	E	A	E	V	H	R	L	V	V
Template Known Secondary structure					S							T	T	S	B							G	G	G	T	G	G	G	G	G	S	S						S	S	B					G	G	G			S				S						T	T	S	B												T		S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	E	D	Q	Q	Y	V	G	I	I	S	K	G	M	L	L	R	A	L	D	R	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	E	H	D	V	V	K	G	I	V	S	L	S	D	I	L	Q	A	L	V	L	T	G
Template Known Secondary structure				T	T	S	B																S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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