Job Description P14175 Confidence 99.43% Date Thu Jan 5 11:33:55 GMT 2012 Rank 93 Aligned Residues 152 % Identity 16% Template c2qlvF_ PDB info PDB header:transferase/protein binding Chain: F: PDB Molecule:nuclear protein snf4; PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1 Resolution 2.60 Å

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	M	Q	N	G	E	V	V	Q	V	G	T	P	D	E	I	L	N	N	P	A	N	D	Y	V	R	T	F	F	R	G	V	D	I	S	Q	V	F	S	A	K	D	I	A	R	R	T	P	N	G	L	I	R	K	T	P	G	F	G	P	R	S	A	L	K	L	L	Q	D	E	D	R	E	Y	G	Y	V	I
Query Conservation
Alig confidence																																			.	.	.														.	.	.
Template Conservation																																			.	.	.														.	.	.
Template Sequence		P	L	I	D	Q	R	E	I	V	V	S	V	L	T	Q	Y	R	I	L	K	F	V	A	L	N	C	R	E	T	H	F	L	K	.	.	.	I	P	I	G	D	L	N	I	I	T	Q	D	N	.	.	.	M	K	S	C	Q	M	T	T	P	V	I	D	V	I	Q	M	L	T	Q	G	R	V	S	S	V	P	I	I
Template Known Secondary structure																												G	G	G	G	G			.	.	.	S	B	G	G	G	T	T	T	S	B		S	S	.	.	.				B		T	T	S	B											T	T		S
Template Predicted Secondary structure																																			.	.	.														.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.													.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		E	R	G	N	K	F	V	G	A	V	S	I	D	S	L	K	T	A	L	T	Q	Q	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	A	L	I	D	A	P	L	A	V	D	A	Q	T	P	L	S	E	L	L	S	H	V	G	Q	A	P	C	A	.	V	P	V	V	D	E	D	Q	Q	Y	V	G
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		D	E	N	G	Y	L	I	N	V	Y	E	A	Y	D	V	L	G	L	I	K	G	G	I	Y	N	D	L	S	L	S	V	G	E	A	L	M	R	R	S	D	D	F	E	G	V	Y	T	C	T	K	N	D	K	L	S	T	I	M	D	N	I	R	K	A	R	V	H	R	F	F	V	V	D	D	V	G	R	L	V	G
Template Known Secondary structure			T	T		B							T	T							T	T	S			G	G	G	G	S	B					T	T	S	S		T	T									T	T		B											S										S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	K	G	M	L	L	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	T	L	S	D	I	L	K	Y	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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