Job Description P14175 Confidence 100.00% Date Thu Jan 5 11:33:55 GMT 2012 Rank 42 Aligned Residues 216 % Identity 24% Template c2cbzA_ PDB info PDB header:transport Chain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1 Resolution 1.5 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	E	I	K	N	L	Y	K	I	F	G	E	H	P	Q	R	A	F	K	Y	I	E	Q	G	L	S	K	E	Q	I	L	E	K	T	G	L	S	L	G	V	K	D	A	S	L	A	I	E	E	G	E	I	F	V	I	M	G	L	S	G	S	G	K	S	T	M	V	R	L	L	N	R	L	I	E	P	T	R	G
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	T	V	R	N	A	T	F	T	W	A	R	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	L	N	G	I	T	F	S	I	P	E	G	A	L	V	A	V	V	G	Q	V	G	C	G	K	S	S	L	L	S	A	L	L	A	E	M	D	K	V	E	G
Template Known Secondary structure												S		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.																							.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		Q	V	L	I	D	G	V	D	I	A	K	I	S	D	A	E	L	R	E	V	R	R	K	K	I	A	M	V	F	Q	S	F	A	L	M	P	H	M	T	V	L	D	N	T	A	F	G	M	E	L	A	G	I	N	A	E	E	R	R	E	K	A	L	D	A	L	R	Q	V	G	L	.	.	.	.	E	N	Y	A	H
Query Conservation																																																																									.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																																								.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		H	V	A	I	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	Y	V	P	Q	Q	.	A	W	I	Q	N	D	S	L	R	E	N	I	L	F	G	C	Q	L	E	E	P	Y	Y	R	S	V	I	Q	A	C	A	L	L	P	D	L	E	I	L	P	S	G	D	R	T	E	I	G
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	.					S									T	T	S				T	T									T	T						T	T	S	T	T	G	G	G	S			S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		701	.	.	.	.	.																		.	.	.	710	.	.	.	.		.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		S	Y	P	D	E	L	S	G	G	M	R	Q	R	V	G	L	A	R	A	L	A	I	N	P	D	I	L	L	M	D	E	A	F	S	A	L	D	P	L	I	R	T	E	M	Q	D	E	L	V	K	L	Q	.	A	K	H	Q	R	T	I	V	F	I	S	H	D	L	D	E	A	M	R	I	G	D	R	I	A	I	M
Query Conservation																																																						.
Alig confidence																																																						.																				.
Template Conservation																																																																										.
Template Sequence		E	K	G	V	N	L	S	G	G	Q	K	Q	R	V	S	L	A	R	A	V	Y	S	N	A	D	I	Y	L	F	D	D	P	L	S	A	V	D	A	H	V	G	K	H	I	F	E	N	V	I	G	P	K	G	M	L	K	N	K	T	R	I	L	V	T	H	S	M	S	Y	L	P	Q	.	V	D	V	I	I	V	M
Template Known Secondary structure		T	T	S	B																					S						S	T	T	T	T	S												T	T	S	T	T	S	T	T	T	T	S							S		S	T	T	G	G	G	.	S	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		763	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.		.	.	.	.	.	840	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	G	E	V	V	Q	V	G	T	P	D	E	I	L	N	N	P	A	N	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	K	I	S	E	M	G	S	Y	Q	E	L	L	A	R	D	G	A	F	A
Template Known Secondary structure			T	T															T	S
Template Predicted Secondary structure
Template SS confidence
		842	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions