Job Description P14175 Confidence 100.00% Date Thu Jan 5 11:33:55 GMT 2012 Rank 6 Aligned Residues 275 % Identity 35% Template c1z47B_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	E	I	K	N	L	Y	K	I	F	.	G	E	H	P	Q	R	A	F	K	Y	I	E	Q	G	L	S	K	E	Q	I	L	E	K	T	G	L	S	L	G	V	K	D	A	S	L	A	I	E	E	G	E	I	F	V	I	M	G	L	S	G	S	G	K	S	T	M	V	R	L	L	N	R	L	I	E	P	T	R	G
Query Conservation												.
Alig confidence												.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	F	V	G	V	E	K	I	Y	P	G	G	A	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	G	V	S	F	Q	I	R	E	G	E	M	V	G	L	L	G	P	S	G	S	G	K	T	T	I	L	R	L	I	A	G	L	E	R	P	T	K	G
Template Known Secondary structure												T	T	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T								S	T	T	S	S										T	S	S			S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30																									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	L	I	D	G	V	D	I	A	K	I	S	D	A	E	L	R	E	V	R	R	K	K	I	A	M	V	F	Q	S	F	A	L	M	P	H	M	T	V	L	D	N	T	A	F	G	M	E	L	A	G	I	N	A	E	E	R	R	E	K	A	L	D	A	L	R	Q	V	G	L	E	N	Y	A	H	S	Y	P	D
Query Conservation
Alig confidence																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		D	V	W	I	G	G	K	R	V	T	D	L	P	P	Q	.	.	.	.	.	.	K	R	N	V	G	L	V	F	Q	N	Y	A	L	F	Q	H	M	T	V	Y	D	N	V	S	F	G	L	R	E	K	R	V	P	K	D	E	M	D	A	R	V	R	E	L	L	R	F	M	R	L	E	S	Y	A	N	R	F	P	H
Template Known Secondary structure						T	T				T	T			G	G	.	.	.	.	.	.	G	S	S						T	T					T	T	S								T	T	G	G	G	T	T																	T	T		G	G	G	T	T	S		G	G
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	G	G	M	R	Q	R	V	G	L	A	R	A	L	A	I	N	P	D	I	L	L	M	D	E	A	F	S	A	L	D	P	L	I	R	T	E	M	Q	D	E	L	V	K	L	Q	A	K	H	Q	R	T	I	V	F	I	S	H	D	L	D	E	A	M	R	I	G	D	R	I	A	I	M	Q	N	G	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	A	P	R	P	Q	V	L	L	F	D	E	P	F	A	A	I	D	T	Q	I	R	R	E	L	R	T	F	V	R	Q	V	H	D	E	M	G	V	T	S	V	F	V	T	H	D	Q	E	E	A	L	E	V	A	D	R	V	L	V	L	H	E	G	N	V
Template Known Secondary structure		G	S															T	T			S						S	T	T	T	T	S																												S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	V	G	T	P	D	E	I	L	N	N	P	A	N	D	Y	V	R	T	F	F	R	G	V	D	I	S	Q	V	F	S	A	K	D	I	A	R	R	T	P	N	G	L	I	R	K	T	P	G	F	G	P	R	S	A	L	K	L	L	Q	D	E	D	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	F	G	T	P	E	E	V	Y	E	K	P	G	T	L	F	V	A	S	F	I	G	E	S	N	V	W	T	R	A	V	Q	N	G	R	I	E	V	A	G	A	A	L	P	V	D	P	A	V	S	E	G	S	E	V	A	V	V	V	R	P	K	D	V	E
Template Known Secondary structure													S		S	S							S	S										B	T	T				S	S	S							T	T	S		T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions