Job Description P24169 Confidence 99.51% Date Thu Jan 5 11:40:44 GMT 2012 Rank 199 Aligned Residues 314 % Identity 12% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	Q	Q	H	A	A	K	V	F	N	A	D	K	T	Y	F	V	L	N	G	T	S	S	S	N	K	V	V	L	N	A	L	L	T	P	G	.	D	L	V	L	F	D	R	N	N	H	K	S	N	H	H	G	A	L	L	Q	A	G	A	T	P	V	Y	L	E	T	A	R	N	P	Y	G	F	I	G	G	I	D	A
Query Conservation																																						.
Alig confidence																																						.																	.
Template Conservation																																																							.
Template Sequence		A	E	M	V	N	D	A	V	P	S	I	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	.	F	L	V	K	A	G	S	G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A
Template Known Secondary structure									S	T	T		S						S	S																									T	T					S		G	G	.	G		S	S								T	T			S		S	S	S						T
Template Predicted Secondary structure																																																							.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		258	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																																		.	.	.							.	.	.
Query SS confidence					.	.	.	.	.																																		.	.	.							.	.	.
Query Sequence		H	C	F	.	.	.	.	.	E	E	S	Y	L	R	E	L	I	A	E	V	A	P	Q	R	A	K	E	A	R	P	F	R	L	A	V	I	Q	L	G	T	Y	.	.	.	D	G	T	I	Y	N	.	.	.	A	R	Q	V	V	D	K	I	G	H	L	C	D	Y	I	L	F	D	S	A	W	V	G	Y	E	Q	F
Query Conservation					.	.	.	.	.																																		.	.	.							.	.	.
Alig confidence					.	.	.	.	.																		.	.	.	.	.	.	.	.									.	.	.							.	.	.																								.
Template Conservation																											.	.	.	.	.	.	.	.																																												.
Template Sequence		N	T	L	T	T	P	Y	N	D	L	E	A	V	K	A	L	F	A	E	N	P	G	E	I	A	.	.	.	.	.	.	.	.	G	V	I	L	E	P	I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V	F	D	E	V	M	T	G	.	F	R	I
Template Known Secondary structure		T						T	T										T	T	S	T	T	T			.	.	.	.	.	.	.	.						S	S	B		S	S	S		B				T	T												T	T								T	T	T	B	.	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.																																												.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	M	M	A	D	C	S	P	L	L	L	D	L	N	E	N	D	P	G	I	L	V	T	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	Q	R	Y	V	P	H	K	R	M	N	N	A	F	M	M	H	A	S	T	S	P	F	Y	P	L	F	A	A	L	N
Query Conservation
Alig confidence				.	.	.	.	.											.	.	.	.																									.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.											.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		A	Y	.	.	.	.	.	G	G	V	Q	E	K	F	G	V	T	.	.	.	.	P	D	L	T	T	L	G	K	I	I	G	G	G	L	P	V	G	A	Y	G	G	K	R	E	.	.	.	.	.	.	.	I	M	Q	L	V	A	P	A	G	P	M	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I
Template Known Secondary structure		B	T	.	.	.	.	.	T						T	T			.	.	.	.		S						G	G	G	G	T	T	S											.	.	.	.	.	.	.			T	T	B	T	T	T	S	S	B					T	T	T	T
Template Predicted Secondary structure				.	.	.	.	.											.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		254	.						.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	K	M	H	E	G	V	S	G	R	N	M	W	M	D	C	V	V	N	G	I	N	A	R	K	L	I	L	D	N	C	Q	H	I	R	P	F	V	P	E	L	V	D	G	K	P	W	Q	S	Y	E	T	A	Q	I	A	V	D	L	R	F	F	Q	F	V	P	G	E	H	W	H	S	F	E	G	Y	A	E
Query Conservation
Alig confidence									.	.	.																																																														.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																																														.	.	.	.	.	.	.	.	.
Template Sequence		K	T	L	E	L	L	R	.	.	.	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	G	H	A	A	C	G	G	Q	V	S	G	M	F	G	F	F	F	T	E	G	P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	.	.	.	S	T	T																							T	T									T	T						S	S	S					S					T	T	S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	Y	F	V	D	P	C	K	L	L	L	T	T	P	G	I	D	A	R	N	G	E	Y	E	A	F	G	V	P	A	T	I	L	A	N	F	L	R	E	N	G	V	V	P	E	K	C	D	L	N	S	I	L	F	L	L	T	P	A	E	D	M	A	K	L	Q	Q	L	V	A	L	L	V	R	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	A	G	F	.	.	T	S	L	A	H	T	E	E	D	I	D	A	T	L	A	A	A	R	T	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T					S	S	T	T	S				.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
																																386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions